12 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIP4K2A	PIPK domain-containing protein. (405 aa)
	PIP4K2C	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma. (458 aa)
	PIP4K2B	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta. (411 aa)
	RAB3GAP2	Rab3 GTPase-activating protein non-catalytic subunit isoform C. (1382 aa)
	ULK1A	Unc-51 like autophagy activating kinase 1a isoform A. (1048 aa)
	SNX30	Sorting nexin-30 isoform B. (413 aa)
	WIPI1	WD repeat domain phosphoinositide-interacting protein 1. (443 aa)
	ATG2A	Uncharacterized protein. (1912 aa)
	LRSAM1	E3 ubiquitin-protein ligase LRSAM1. (728 aa)
	SNX7	Sorting nexin-7. (431 aa)
	SNX4	Sorting nexin-4 isoform A. (423 aa)
	RAB3GAP1	Rab3 GTPase-activating protein catalytic subunit. (1012 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG2A	ULK1A	A0A151MUE5	A0A151NRZ2	Uncharacterized protein.	Unc-51 like autophagy activating kinase 1a isoform A.	0.980
ATG2A	WIPI1	A0A151MUE5	A0A151N2G4	Uncharacterized protein.	WD repeat domain phosphoinositide-interacting protein 1.	0.982
PIP4K2A	PIP4K2B	A0A151PCT0	A0A151P5E0	PIPK domain-containing protein.	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.	0.902
PIP4K2A	PIP4K2C	A0A151PCT0	A0A151PG33	PIPK domain-containing protein.	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma.	0.901
PIP4K2B	PIP4K2A	A0A151P5E0	A0A151PCT0	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.	PIPK domain-containing protein.	0.902
PIP4K2B	PIP4K2C	A0A151P5E0	A0A151PG33	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma.	0.901
PIP4K2C	PIP4K2A	A0A151PG33	A0A151PCT0	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma.	PIPK domain-containing protein.	0.901
PIP4K2C	PIP4K2B	A0A151PG33	A0A151P5E0	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma.	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.	0.901
RAB3GAP1	RAB3GAP2	A0A151M0Q3	A0A151P3D4	Rab3 GTPase-activating protein catalytic subunit.	Rab3 GTPase-activating protein non-catalytic subunit isoform C.	0.999
RAB3GAP2	RAB3GAP1	A0A151P3D4	A0A151M0Q3	Rab3 GTPase-activating protein non-catalytic subunit isoform C.	Rab3 GTPase-activating protein catalytic subunit.	0.999
SNX30	SNX4	A0A151NEA0	A0A151M0X3	Sorting nexin-30 isoform B.	Sorting nexin-4 isoform A.	0.899
SNX30	ULK1A	A0A151NEA0	A0A151NRZ2	Sorting nexin-30 isoform B.	Unc-51 like autophagy activating kinase 1a isoform A.	0.435
SNX4	SNX30	A0A151M0X3	A0A151NEA0	Sorting nexin-4 isoform A.	Sorting nexin-30 isoform B.	0.899
SNX4	SNX7	A0A151M0X3	A0A151M559	Sorting nexin-4 isoform A.	Sorting nexin-7.	0.899
SNX4	ULK1A	A0A151M0X3	A0A151NRZ2	Sorting nexin-4 isoform A.	Unc-51 like autophagy activating kinase 1a isoform A.	0.577
SNX4	WIPI1	A0A151M0X3	A0A151N2G4	Sorting nexin-4 isoform A.	WD repeat domain phosphoinositide-interacting protein 1.	0.466
SNX7	SNX4	A0A151M559	A0A151M0X3	Sorting nexin-7.	Sorting nexin-4 isoform A.	0.899
SNX7	ULK1A	A0A151M559	A0A151NRZ2	Sorting nexin-7.	Unc-51 like autophagy activating kinase 1a isoform A.	0.435
ULK1A	ATG2A	A0A151NRZ2	A0A151MUE5	Unc-51 like autophagy activating kinase 1a isoform A.	Uncharacterized protein.	0.980
ULK1A	SNX30	A0A151NRZ2	A0A151NEA0	Unc-51 like autophagy activating kinase 1a isoform A.	Sorting nexin-30 isoform B.	0.435