16 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZCCHC17	Nucleolar protein of. (235 aa)
	RPL26L1	60S ribosomal protein L26-like 1. (116 aa)
	RPL4	60S ribosomal protein L4. (363 aa)
	RPL7	60S ribosomal protein L7. (223 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (186 aa)
	RPL30	60S ribosomal protein L30. (175 aa)
	RPL3	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (407 aa)
	Y1Q_0009070	Olfactory receptor. (317 aa)
	RPL10L	60S ribosomal protein L10. (77 aa)
	RPL29	60S ribosomal protein L29. (260 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
	RPL31	60S ribosomal protein L31. (180 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPLP1	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	RPL9	60S ribosomal protein L9. (143 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL10L	RPL15	A0A151ND45	A0A151MQV5	60S ribosomal protein L10.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.997
RPL10L	RPL18A	A0A151ND45	A0A151PFJ2	60S ribosomal protein L10.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.998
RPL10L	RPL19	A0A151ND45	A0A151P5D8	60S ribosomal protein L10.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.998
RPL10L	RPL26L1	A0A151ND45	A0A151M6Q5	60S ribosomal protein L10.	60S ribosomal protein L26-like 1.	0.998
RPL10L	RPL29	A0A151ND45	A0A151NGG1	60S ribosomal protein L10.	60S ribosomal protein L29.	0.998
RPL10L	RPL3	A0A151ND45	A0A151N257	60S ribosomal protein L10.	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.986
RPL10L	RPL30	A0A151ND45	A0A151MY00	60S ribosomal protein L10.	60S ribosomal protein L30.	0.999
RPL10L	RPL31	A0A151ND45	A0A151NWY9	60S ribosomal protein L10.	60S ribosomal protein L31.	0.998
RPL10L	RPL4	A0A151ND45	A0A151M8X2	60S ribosomal protein L10.	60S ribosomal protein L4.	0.998
RPL10L	RPL6	A0A151ND45	A0A151NSU6	60S ribosomal protein L10.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.998
RPL10L	RPL7	A0A151ND45	A0A151MN50	60S ribosomal protein L10.	60S ribosomal protein L7.	0.996
RPL10L	RPL9	A0A151ND45	A0A151PAE3	60S ribosomal protein L10.	60S ribosomal protein L9.	0.999
RPL10L	RPLP1	A0A151ND45	A0A151P8E5	60S ribosomal protein L10.	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.996
RPL15	RPL10L	A0A151MQV5	A0A151ND45	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L10.	0.997
RPL15	RPL18A	A0A151MQV5	A0A151PFJ2	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
RPL15	RPL19	A0A151MQV5	A0A151P5D8	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
RPL15	RPL26L1	A0A151MQV5	A0A151M6Q5	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L26-like 1.	0.999
RPL15	RPL29	A0A151MQV5	A0A151NGG1	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L29.	0.999
RPL15	RPL3	A0A151MQV5	A0A151N257	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.991
RPL15	RPL30	A0A151MQV5	A0A151MY00	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L30.	0.999