STRINGSTRING
FAU FAU RPS23 RPS23 ZCCHC17 ZCCHC17 RPS15 RPS15 RPS16 RPS16 RPL18A RPL18A RPS3A RPS3A RPL9 RPL9 APOD APOD RPS26 RPS26 RPL6 RPL6 RPL31 RPL31 RPSA RPSA RPL19 RPL19 RPS11 RPS11 RPLP1 RPLP1 DHX29 DHX29 RPL30 RPL30 RPL35 RPL35 Y1Q_0008192 Y1Q_0008192 RPL3 RPL3 RPS2 RPS2 Y1Q_0009070 Y1Q_0009070 RPS18 RPS18 RPS7 RPS7 RPL36 RPL36 RPL10L RPL10L RPL29 RPL29 RPL36A RPL36A MCTS1 MCTS1 RPL28 RPL28 RPL34 RPL34 RPS17 RPS17 RPS5 RPS5 RPS19 RPS19 RPL27A RPL27A RPL26L1 RPL26L1 RPL4 RPL4 Y1Q_0000679 Y1Q_0000679 RPS13 RPS13 RPL24 RPL24 RPL7A RPL7A RPL7 RPL7 RPS20 RPS20 RPL15 RPL15 RPL21 RPL21 RPS24-1 RPS24-1 RPS25 RPS25
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAU40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
RPS2340S ribosomal protein S23 isoform A; Belongs to the universal ribosomal protein uS12 family. (143 aa)
ZCCHC17Nucleolar protein of. (235 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (161 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (167 aa)
RPL18A60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
RPL960S ribosomal protein L9. (143 aa)
APODApolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (339 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
RPL3160S ribosomal protein L31. (180 aa)
RPSA40S ribosomal protein SA. (149 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
RPS1140S ribosomal protein S11 isoform A; Belongs to the universal ribosomal protein uS17 family. (158 aa)
RPLP160S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
DHX29ATP-dependent RNA helicase DHX29 isoform B. (1203 aa)
RPL3060S ribosomal protein L30. (175 aa)
RPL3560S ribosomal protein L35. (123 aa)
Y1Q_0008192Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (126 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (407 aa)
RPS240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (221 aa)
Y1Q_0009070Olfactory receptor. (317 aa)
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (186 aa)
RPL10L60S ribosomal protein L10. (77 aa)
RPL2960S ribosomal protein L29. (260 aa)
RPL36A60S ribosomal protein L36a isoform B; Belongs to the eukaryotic ribosomal protein eL42 family. (150 aa)
MCTS1Malignant T-cell-amplified sequence. (181 aa)
RPL2860S ribosomal protein L28. (153 aa)
RPL3460S ribosomal protein L34. (117 aa)
RPS1740S ribosomal protein S17. (1124 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (514 aa)
RPS1940S ribosomal protein S19. (515 aa)
RPL27A60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
RPL26L160S ribosomal protein L26-like 1. (116 aa)
RPL460S ribosomal protein L4. (363 aa)
Y1Q_0000679Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (111 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (147 aa)
RPL2460S ribosomal protein L24. (157 aa)
RPL7A60S ribosomal protein L7a. (266 aa)
RPL760S ribosomal protein L7. (223 aa)
RPS2040S ribosomal protein S20. (119 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (186 aa)
RPL2160S ribosomal protein L21. (147 aa)
RPS24-140S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (126 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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