STRINGSTRING
Y1Q_0000878 Y1Q_0000878 RPS26 RPS26 RPL6 RPL6 RPL31 RPL31 RPL19 RPL19 LARP4B LARP4B RPL18A RPL18A RPS23 RPS23 NUFIP2 NUFIP2 RPL30 RPL30 RPL7A RPL7A ABCF1 ABCF1 BTF3L4 BTF3L4 RPL24 RPL24 RPL36 RPL36
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0000878Uncharacterized protein. (620 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
RPL3160S ribosomal protein L31. (180 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
LARP4BLa-related protein 4B. (725 aa)
RPL18A60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
RPS2340S ribosomal protein S23 isoform A; Belongs to the universal ribosomal protein uS12 family. (143 aa)
NUFIP2Nuclear fragile X mental retardation-interacting protein 2. (647 aa)
RPL3060S ribosomal protein L30. (175 aa)
RPL7A60S ribosomal protein L7a. (266 aa)
ABCF1ATP-binding cassette sub-family F member 1. (927 aa)
BTF3L4Transcription factor BTF3; Belongs to the NAC-beta family. (158 aa)
RPL2460S ribosomal protein L24. (157 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (186 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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