STRINGSTRING
COL18A1 COL18A1 LOXL3-2 LOXL3-2 SCARA3 SCARA3 VWA1 VWA1 AGRN AGRN EMILIN1 EMILIN1 AMELX AMELX Y1Q_0017394 Y1Q_0017394 Y1Q_0014375 Y1Q_0014375 Y1Q_0023186 Y1Q_0023186 MATN2 MATN2 ADAMTS6-2 ADAMTS6-2 MATN3 MATN3 COL15A1 COL15A1 VCAN VCAN THBS4 THBS4 LAMA2 LAMA2 MATN1 MATN1 Y1Q_0006778 Y1Q_0006778 Y1Q_0019754 Y1Q_0019754 HSPG2 HSPG2 C1QTNF3-1 C1QTNF3-1 IMPG1-1 IMPG1-1 HSPG2-2 HSPG2-2 Y1Q_0019407 Y1Q_0019407 FRAS1L FRAS1L COL1A2 COL1A2 TGFBI TGFBI Y1Q_0002547 Y1Q_0002547 COL11A2 COL11A2 KAZALD1 KAZALD1 TGFB3 TGFB3 RBP3 RBP3 NTN4 NTN4 LAMA4 LAMA4 LAMB3 LAMB3 COL25A1 COL25A1 TNN TNN LAMC3 LAMC3 LAMC1 LAMC1 VIT VIT COL11A1 COL11A1 COL5A1 COL5A1 LAMC3-2 LAMC3-2 MEGF9 MEGF9 Y1Q_0005609 Y1Q_0005609 COL27A1 COL27A1 ABI3BP ABI3BP SENP7 SENP7 ZPLD1 ZPLD1 COL8A1 COL8A1 CCDC80 CCDC80 Y1Q_0021968 Y1Q_0021968 SMOC1 SMOC1 Y1Q_0001529 Y1Q_0001529 ACAN ACAN CILP CILP Y1Q_0004218 Y1Q_0004218 Y1Q_0004217 Y1Q_0004217 TGFBI-2 TGFBI-2 LAMB2 LAMB2 NTNG1 NTNG1 Y1Q_0018210 Y1Q_0018210 USHBP1 USHBP1 Y1Q_0005042 Y1Q_0005042 LAMA1 LAMA1 Y1Q_0009245 Y1Q_0009245 THBS2-2 THBS2-2 SMOC2 SMOC2 COL28A1 COL28A1 LUM LUM DCN DCN RARRES2 RARRES2 PTPRZ1 PTPRZ1 MFAP4 MFAP4 PAQR4 PAQR4 Y1Q_0014035 Y1Q_0014035 NID1 NID1 ECM2 ECM2 LOXL3 LOXL3 COL1A1 COL1A1 COL2A1 COL2A1 Y1Q_0020531 Y1Q_0020531 USH2A USH2A Y1Q_0015918 Y1Q_0015918 COL6A3 COL6A3 Y1Q_0018525 Y1Q_0018525 FREM3-1 FREM3-1 COMP COMP MATN4 MATN4 LAMA5 LAMA5 BCAN BCAN ADAMTS9 ADAMTS9 Y1Q_0013350 Y1Q_0013350 VWA2 VWA2 CUNH2orf82 CUNH2orf82 CASK CASK RELL2 RELL2 LAMB4 LAMB4 LAMB1-2 LAMB1-2 DSPP DSPP MMRN1 MMRN1 SPARC SPARC COCH COCH Y1Q_0020946 Y1Q_0020946 Y1Q_0020949 Y1Q_0020949 Y1Q_0020947 Y1Q_0020947 CYR61 CYR61 PVALB PVALB TIMP3 TIMP3 Y1Q_0024156 Y1Q_0024156 Y1Q_0009299 Y1Q_0009299 CHADL CHADL NTN4-2 NTN4-2 CUNH11orf53 CUNH11orf53 LAMA1-2 LAMA1-2 AMTN AMTN RBP4B RBP4B OTOL1 OTOL1 COL6A3-2 COL6A3-2 COL3A1 COL3A1 COL5A2 COL5A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL18A1Collagen alpha-1(XVIII) chain isoform B. (1523 aa)
LOXL3-2Uncharacterized protein. (513 aa)
SCARA3Scavenger receptor class A member 3. (424 aa)
VWA1Von Willebrand factor A domain-containing protein 1. (603 aa)
AGRNAgrin isoform C. (2031 aa)
EMILIN1EMILIN-1. (1017 aa)
AMELXAmelogenin, X isoform. (231 aa)
Y1Q_0017394Collagen alpha-1(XI) chain-like. (492 aa)
Y1Q_0014375Uncharacterized protein. (76 aa)
Y1Q_0023186Uncharacterized protein. (1015 aa)
MATN2Matrilin-2 isoform C. (1282 aa)
ADAMTS6-2Uncharacterized protein. (1105 aa)
MATN3Matrilin-3. (414 aa)
COL15A1Collagen alpha-1(XV) chain. (1333 aa)
VCANVersican core protein. (3626 aa)
THBS4Uncharacterized protein. (952 aa)
LAMA2Laminin subunit alpha-2 isoform F. (3443 aa)
MATN1Cartilage matrix protein. (493 aa)
Y1Q_0006778Uncharacterized protein. (312 aa)
Y1Q_0019754Prolactin-like. (99 aa)
HSPG2Basement membrane-specific heparan sulfate proteoglycan core protein isoform A. (1261 aa)
C1QTNF3-1Complement C1q tumor necrosis factor-related protein 3 isoform B. (306 aa)
IMPG1-1Interphotoreceptor matrix proteoglycan 1 isoform B. (906 aa)
HSPG2-2Basement membrane-specific heparan sulfate proteoglycan core protein. (2269 aa)
Y1Q_0019407Uncharacterized protein. (2572 aa)
FRAS1LExtracellular matrix protein FRAS1 isoform B. (3468 aa)
COL1A2Collagen alpha-2(I) chain. (1363 aa)
TGFBITransforming growth factor-beta-induced protein ig-h3 isoform B. (873 aa)
Y1Q_0002547Uncharacterized protein. (983 aa)
COL11A2Fibrillar collagen NC1 domain-containing protein. (860 aa)
KAZALD1Kazal-type serine protease inhibitor domain-containing protein 1. (295 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
RBP3Retinol-binding protein 3. (1236 aa)
NTN4Netrin-4. (638 aa)
LAMA4Laminin subunit alpha-4. (1825 aa)
LAMB3Laminin subunit beta-3 isoform B. (1232 aa)
COL25A1Uncharacterized protein. (143 aa)
TNNTenascin-N. (1357 aa)
LAMC3Laminin subunit gamma-3. (1574 aa)
LAMC1Laminin subunit gamma-1. (1184 aa)
VITVitrin isoform A. (721 aa)
COL11A1Collagen alpha-1(XI) chain. (1810 aa)
COL5A1Fibrillar collagen NC1 domain-containing protein. (1856 aa)
LAMC3-2Uncharacterized protein. (1535 aa)
MEGF9Multiple epidermal growth factor-like domains protein 9 isoform B. (477 aa)
Y1Q_0005609Uncharacterized protein. (1687 aa)
COL27A1Collagen alpha-1(I) chain-like. (1858 aa)
ABI3BPTarget of Nesh-SH3 isoform F. (1483 aa)
SENP7Sentrin-specific protease 7 isoform E. (2566 aa)
ZPLD1Zona pellucida-like domain-containing protein 1. (407 aa)
COL8A1Collagen alpha-1(VIII) chain. (761 aa)
CCDC80Coiled-coil domain-containing protein 80. (832 aa)
Y1Q_0021968Basement membrane-specific heparan sulfate proteoglycan core protein-like. (789 aa)
SMOC1SPARC-related modular calcium-binding protein 1. (458 aa)
Y1Q_0001529Uncharacterized protein. (415 aa)
ACANAggrecan core protein. (2071 aa)
CILPCartilage intermediate layer protein 1 isoform A. (1181 aa)
Y1Q_0004218Uncharacterized protein. (91 aa)
Y1Q_0004217Uncharacterized protein. (322 aa)
TGFBI-2Uncharacterized protein. (688 aa)
LAMB2Uncharacterized protein. (1523 aa)
NTNG1Netrin-G1. (458 aa)
Y1Q_0018210Uncharacterized protein. (116 aa)
USHBP1Usher syndrome type-1C protein-binding protein 1. (430 aa)
Y1Q_0005042Uncharacterized protein. (107 aa)
LAMA1Laminin subunit alpha-1. (3149 aa)
Y1Q_0009245Uncharacterized protein. (1183 aa)
THBS2-2Uncharacterized protein. (1182 aa)
SMOC2SPARC-related modular calcium-binding protein 2 isoform A. (447 aa)
COL28A1Collagen alpha-1(XXVIII) chain isoform B. (1198 aa)
LUMLumican. (388 aa)
DCNDecorin; May affect the rate of fibrils formation. (320 aa)
RARRES2Retinoic acid receptor responder protein 2. (156 aa)
PTPRZ1Protein-tyrosine-phosphatase. (1295 aa)
MFAP4Microfibril-associated glycoprotein 4. (256 aa)
PAQR4Progestin and adipoQ receptor family member 4. (272 aa)
Y1Q_0014035Collagen alpha-1(IX) chain-like. (818 aa)
NID1Nidogen-1. (1307 aa)
ECM2Extracellular matrix protein 2. (747 aa)
LOXL3Lysyl oxidase-like protein 3. (775 aa)
COL1A1Collagen alpha-1(I) chain. (1330 aa)
COL2A1Fibrillar collagen NC1 domain-containing protein. (1494 aa)
Y1Q_0020531Collagen alpha-6(VI) chain-like. (432 aa)
USH2AUsherin isoform J. (4946 aa)
Y1Q_0015918Uncharacterized protein. (255 aa)
COL6A3Collagen alpha-3(VI) chain. (1930 aa)
Y1Q_0018525Uncharacterized protein. (1079 aa)
FREM3-1FRAS1-related extracellular matrix protein 3 isoform A. (2756 aa)
COMPUncharacterized protein. (774 aa)
MATN4Matrilin-4. (606 aa)
LAMA5Uncharacterized protein. (3666 aa)
BCANBrevican core protein isoform A. (1153 aa)
ADAMTS9A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform C. (1150 aa)
Y1Q_0013350Collagen alpha-1(V) chain-like. (1245 aa)
VWA2Von Willebrand factor A domain-containing protein 2. (825 aa)
CUNH2orf82Uncharacterized protein. (121 aa)
CASKPeripheral plasma membrane protein CASK isoform B; Belongs to the MAGUK family. (926 aa)
RELL2RELT-like protein 2. (419 aa)
LAMB4Uncharacterized protein. (1807 aa)
LAMB1-2Uncharacterized protein. (1788 aa)
DSPPDentin sialophosphoprotein isoform A. (931 aa)
MMRN1Multimerin-1 isoform A. (1155 aa)
SPARCSPARC. (298 aa)
COCHCochlin. (546 aa)
Y1Q_0020946Uncharacterized protein. (397 aa)
Y1Q_0020949Calx-beta domain-containing protein. (352 aa)
Y1Q_0020947Uncharacterized protein. (130 aa)
CYR61Protein CYR61. (374 aa)
PVALBParvalbumin alpha; Belongs to the parvalbumin family. (110 aa)
TIMP3Metalloproteinase inhibitor 3. (212 aa)
Y1Q_0024156Hibernation-associated plasma protein HP-20-like. (83 aa)
Y1Q_0009299Uncharacterized protein. (198 aa)
CHADLChondroadherin-like protein. (706 aa)
NTN4-2Uncharacterized protein. (628 aa)
CUNH11orf53Uncharacterized protein. (252 aa)
LAMA1-2Uncharacterized protein. (3096 aa)
AMTNAmelotin. (375 aa)
RBP4BPurpurin; Belongs to the calycin superfamily. Lipocalin family. (224 aa)
OTOL1Otolin-1. (570 aa)
COL6A3-2Uncharacterized protein. (2973 aa)
COL3A1Uncharacterized protein. (1456 aa)
COL5A2Uncharacterized protein. (1493 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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