8 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHD3-2	Uncharacterized protein. (1966 aa)
	MTA1	Metastasis-associated protein MTA1. (590 aa)
	AIRE	Autoimmune regulator isoform B. (519 aa)
	MTA1-2	Uncharacterized protein. (694 aa)
	CHD5	Uncharacterized protein. (1864 aa)
	GATAD2A	Transcriptional repressor p66-alpha isoform C. (621 aa)
	CHD3	Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
	MTA2	Uncharacterized protein. (676 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIRE	GATAD2A	A0A151NUV3	A0A151MM98	Autoimmune regulator isoform B.	Transcriptional repressor p66-alpha isoform C.	0.765
AIRE	MTA1	A0A151NUV3	A0A151P3Q2	Autoimmune regulator isoform B.	Metastasis-associated protein MTA1.	0.693
AIRE	MTA1-2	A0A151NUV3	A0A151NSM9	Autoimmune regulator isoform B.	Uncharacterized protein.	0.693
AIRE	MTA2	A0A151NUV3	A0A151M3Y3	Autoimmune regulator isoform B.	Uncharacterized protein.	0.693
CHD3	GATAD2A	A0A151MCQ8	A0A151MM98	Chromodomain-helicase-DNA-binding protein 3.	Transcriptional repressor p66-alpha isoform C.	0.779
CHD3	MTA1	A0A151MCQ8	A0A151P3Q2	Chromodomain-helicase-DNA-binding protein 3.	Metastasis-associated protein MTA1.	0.693
CHD3	MTA1-2	A0A151MCQ8	A0A151NSM9	Chromodomain-helicase-DNA-binding protein 3.	Uncharacterized protein.	0.693
CHD3	MTA2	A0A151MCQ8	A0A151M3Y3	Chromodomain-helicase-DNA-binding protein 3.	Uncharacterized protein.	0.693
CHD3-2	GATAD2A	A0A151N497	A0A151MM98	Uncharacterized protein.	Transcriptional repressor p66-alpha isoform C.	0.779
CHD3-2	MTA1	A0A151N497	A0A151P3Q2	Uncharacterized protein.	Metastasis-associated protein MTA1.	0.693
CHD3-2	MTA1-2	A0A151N497	A0A151NSM9	Uncharacterized protein.	Uncharacterized protein.	0.693
CHD3-2	MTA2	A0A151N497	A0A151M3Y3	Uncharacterized protein.	Uncharacterized protein.	0.693
CHD5	GATAD2A	A0A151N3K5	A0A151MM98	Uncharacterized protein.	Transcriptional repressor p66-alpha isoform C.	0.779
CHD5	MTA1	A0A151N3K5	A0A151P3Q2	Uncharacterized protein.	Metastasis-associated protein MTA1.	0.693
CHD5	MTA1-2	A0A151N3K5	A0A151NSM9	Uncharacterized protein.	Uncharacterized protein.	0.693
CHD5	MTA2	A0A151N3K5	A0A151M3Y3	Uncharacterized protein.	Uncharacterized protein.	0.693
GATAD2A	AIRE	A0A151MM98	A0A151NUV3	Transcriptional repressor p66-alpha isoform C.	Autoimmune regulator isoform B.	0.765
GATAD2A	CHD3	A0A151MM98	A0A151MCQ8	Transcriptional repressor p66-alpha isoform C.	Chromodomain-helicase-DNA-binding protein 3.	0.779
GATAD2A	CHD3-2	A0A151MM98	A0A151N497	Transcriptional repressor p66-alpha isoform C.	Uncharacterized protein.	0.779
GATAD2A	CHD5	A0A151MM98	A0A151N3K5	Transcriptional repressor p66-alpha isoform C.	Uncharacterized protein.	0.779