STRINGSTRING
XRCC5 XRCC5 ITGAD ITGAD MATN4 MATN4 COL20A1 COL20A1 ITGA10-2 ITGA10-2 VWA3B VWA3B CPNE4 CPNE4 Y1Q_0018540 Y1Q_0018540 Y1Q_0004465 Y1Q_0004465 ITIH5 ITIH5 Y1Q_0023489 Y1Q_0023489 ITIH2 ITIH2 CACNA2D1 CACNA2D1 CPNE8-2 CPNE8-2 COCH COCH CACHD1 CACHD1 CLCA2 CLCA2 CACNA2D4-2 CACNA2D4-2 INTS6 INTS6 ITGAE ITGAE COL6A3-2 COL6A3-2 COL6A1 COL6A1 COL6A2 COL6A2 CFB-2 CFB-2 CPNE8 CPNE8 DDX26B DDX26B VWA1 VWA1 VWA3A VWA3A CACNA2D4 CACNA2D4 COL7A1 COL7A1 MATN2 MATN2 COL14A1 COL14A1 ITGA2 ITGA2 ITGA1 ITGA1 ITGAL ITGAL COL12A1 COL12A1 MDN1-2 MDN1-2 BRPF1 BRPF1 Y1Q_0018115 Y1Q_0018115 CPNE2 CPNE2 Y1Q_0019407 Y1Q_0019407 ANTXR2 ANTXR2 ANTXRL-2 ANTXRL-2 VWA2 VWA2 VWF VWF VWA5B1 VWA5B1 VIT VIT CACNA2D2 CACNA2D2 VWA9 VWA9 ITGA10 ITGA10 ITIH6-1 ITIH6-1 PSMD4 PSMD4 CPNE6 CPNE6 COL28A1 COL28A1 Y1Q_0011345 Y1Q_0011345 Y1Q_0019921 Y1Q_0019921 VWA5A VWA5A ANTXRL ANTXRL CFB CFB C2 C2 MATN3 MATN3 GTF2H2 GTF2H2 CPNE3 CPNE3 MATN1 MATN1 VWA5B1L VWA5B1L COL21A1 COL21A1 COL22A1 COL22A1 Y1Q_0020531 Y1Q_0020531 COL6A3 COL6A3 CPNE4-2 CPNE4-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XRCC5X-ray repair cross-complementing protein 5 isoform A. (857 aa)
ITGADIntegrin alpha-D; Belongs to the integrin alpha chain family. (1153 aa)
MATN4Matrilin-4. (606 aa)
COL20A1Collagen alpha-1(XX) chain. (1311 aa)
ITGA10-2VWFA domain-containing protein; Belongs to the integrin alpha chain family. (893 aa)
VWA3BVon Willebrand factor A domain-containing protein 3B isoform C. (1329 aa)
CPNE4Copine-4. (504 aa)
Y1Q_0018540VWFA domain-containing protein. (263 aa)
Y1Q_0004465VWFA domain-containing protein. (270 aa)
ITIH5Inter-alpha-trypsin inhibitor heavy chain H5. (951 aa)
Y1Q_0023489Uncharacterized protein. (2594 aa)
ITIH2Inter-alpha-trypsin inhibitor heavy chain H2 isoform A. (1001 aa)
CACNA2D1Calcium channel, voltage-dependent, alpha 2/delta subunit 1 preproprotein isoform B. (989 aa)
CPNE8-2Uncharacterized protein. (569 aa)
COCHCochlin. (546 aa)
CACHD1VWFA and cache domain-containing protein 1 isoform A. (1223 aa)
CLCA2Calcium-activated chloride channel regulator 2. (858 aa)
CACNA2D4-2VWFA domain-containing protein. (1071 aa)
INTS6Integrator complex subunit 6. (821 aa)
ITGAEIntegrin alpha-E isoform A; Belongs to the integrin alpha chain family. (1215 aa)
COL6A3-2Uncharacterized protein. (2973 aa)
COL6A1Collagen alpha-1(VI) chain isoform B. (1045 aa)
COL6A2Collagen alpha-2(VI) chain. (1035 aa)
CFB-2Uncharacterized protein; Belongs to the peptidase S1 family. (371 aa)
CPNE8Copine-8. (588 aa)
DDX26BVWFA domain-containing protein. (935 aa)
VWA1Von Willebrand factor A domain-containing protein 1. (603 aa)
VWA3AVon Willebrand factor A domain-containing protein 3A. (1197 aa)
CACNA2D4Voltage-dependent calcium channel subunit alpha-2/delta-4 isoform C. (838 aa)
COL7A1Collagen alpha-1(VII) chain isoform C. (1626 aa)
MATN2Matrilin-2 isoform C. (1282 aa)
COL14A1Uncharacterized protein. (1864 aa)
ITGA2VWFA domain-containing protein; Belongs to the integrin alpha chain family. (1223 aa)
ITGA1VWFA domain-containing protein; Belongs to the integrin alpha chain family. (1137 aa)
ITGALIntegrin alpha-L isoform C; Belongs to the integrin alpha chain family. (921 aa)
COL12A1Collagen alpha-1(XII) chain isoform A. (3058 aa)
MDN1-2Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5010 aa)
BRPF1Uncharacterized protein. (1677 aa)
Y1Q_0018115Collagen alpha-6(VI) chain-like. (460 aa)
CPNE2Uncharacterized protein. (569 aa)
Y1Q_0019407Uncharacterized protein. (2572 aa)
ANTXR2Anthrax toxin receptor; Belongs to the ATR family. (496 aa)
ANTXRL-2Anthrax toxin receptor; Belongs to the ATR family. (521 aa)
VWA2Von Willebrand factor A domain-containing protein 2. (825 aa)
VWFUncharacterized protein. (2826 aa)
VWA5B1Von Willebrand factor A domain-containing protein 5B1. (1131 aa)
VITVitrin isoform A. (721 aa)
CACNA2D2VWFA domain-containing protein. (833 aa)
VWA9Von Willebrand factor A domain-containing protein 9. (518 aa)
ITGA10Integrin alpha-10 isoform A; Belongs to the integrin alpha chain family. (1191 aa)
ITIH6-1Inter-alpha-trypsin inhibitor heavy chain H6 isoform B. (888 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
CPNE6Copine-6 isoform A. (1660 aa)
COL28A1Collagen alpha-1(XXVIII) chain isoform B. (1198 aa)
Y1Q_0011345Collagen alpha-6(VI) chain-like. (372 aa)
Y1Q_0019921VWFA domain-containing protein. (212 aa)
VWA5AVon Willebrand factor A domain-containing protein 5A. (535 aa)
ANTXRLAnthrax toxin receptor-like. (681 aa)
CFBComplement factor B. (414 aa)
C2Complement C2; Belongs to the peptidase S1 family. (772 aa)
MATN3Matrilin-3. (414 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CPNE3Uncharacterized protein. (599 aa)
MATN1Cartilage matrix protein. (493 aa)
VWA5B1LVon Willebrand factor A domain-containing protein 5B1 isoform C. (1274 aa)
COL21A1Collagen alpha-1(XXI) chain. (964 aa)
COL22A1Collagen alpha-1(XXII) chain. (1615 aa)
Y1Q_0020531Collagen alpha-6(VI) chain-like. (432 aa)
COL6A3Collagen alpha-3(VI) chain. (1930 aa)
CPNE4-2C2 domain-containing protein. (617 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.