STRINGSTRING
PDE6B-2 PDE6B-2 PDE1C PDE1C Y1Q_0011439 Y1Q_0011439 PDE11A PDE11A PDE10A PDE10A HDDC2 HDDC2 PDE7B PDE7B PDE8B PDE8B PDE3B PDE3B SAMHD1 SAMHD1 PDE2A PDE2A PDE7A PDE7A PDE9A PDE9A PDE4B PDE4B PDE4B-2 PDE4B-2 PDE3A PDE3A PDE5A PDE5A PDE4D PDE4D PDE1B PDE1B Y1Q_0015372 Y1Q_0015372 PDE6B PDE6B Y1Q_0003978 Y1Q_0003978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE6B-2Phosphodiesterase. (818 aa)
PDE1CPhosphodiesterase. (760 aa)
Y1Q_0011439Phosphodiesterase. (749 aa)
PDE11APhosphodiesterase. (591 aa)
PDE10APhosphodiesterase. (814 aa)
HDDC2HD domain-containing protein 2 isoform A. (198 aa)
PDE7BPhosphodiesterase. (443 aa)
PDE8BPhosphodiesterase. (768 aa)
PDE3BPhosphodiesterase. (815 aa)
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1. (629 aa)
PDE2APhosphodiesterase. (925 aa)
PDE7APhosphodiesterase. (484 aa)
PDE9APhosphodiesterase. (487 aa)
PDE4BPhosphodiesterase. (646 aa)
PDE4B-2Phosphodiesterase. (644 aa)
PDE3APhosphodiesterase. (799 aa)
PDE5APhosphodiesterase. (850 aa)
PDE4DPhosphodiesterase. (678 aa)
PDE1BPhosphodiesterase. (554 aa)
Y1Q_0015372PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family. (399 aa)
PDE6BPhosphodiesterase. (864 aa)
Y1Q_0003978Phosphodiesterase. (876 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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