STRINGSTRING
ALKBH1 ALKBH1 P4HA1 P4HA1 P4HA3 P4HA3 ALKBH8 ALKBH8 Y1Q_0022249 Y1Q_0022249 PLOD3 PLOD3 ALKBH2 ALKBH2 EGLN3 EGLN3 PLOD2 PLOD2 PLOD1 PLOD1 OGFOD3 OGFOD3 P3H1 P3H1 OGFOD1 OGFOD1 P3H2 P3H2 ALKBH6 ALKBH6 P4HTM P4HTM P3H3 P3H3 ALKBH3 ALKBH3 EGLN1 EGLN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALKBH1Alkylated DNA repair alkB-like protein 1. (363 aa)
P4HA1Prolyl 4-hydroxylase subunit alpha-1 isoform C. (577 aa)
P4HA3Prolyl 4-hydroxylase subunit alpha-3. (536 aa)
ALKBH8Alkylated DNA repair alkB-like protein 8. (677 aa)
Y1Q_0022249Uncharacterized protein. (598 aa)
PLOD3Fe2OG dioxygenase domain-containing protein. (711 aa)
ALKBH2Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2. (379 aa)
EGLN3Egl nine-like protein 3. (249 aa)
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A. (763 aa)
PLOD1Fe2OG dioxygenase domain-containing protein. (727 aa)
OGFOD32-oxoglutarate and iron-dependent oxygenase domain-containing protein 3. (322 aa)
P3H1Prolyl 3-hydroxylase 1. (710 aa)
OGFOD1Prolyl 3-hydroxylase OGFOD1. (534 aa)
P3H2Prolyl 3-hydroxylase 2. (552 aa)
ALKBH6Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 6. (200 aa)
P4HTMTransmembrane prolyl 4-hydroxylase. (486 aa)
P3H3Prolyl 3-hydroxylase 3. (657 aa)
ALKBH3Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 3 isoform B. (328 aa)
EGLN1Egl nine-like protein 1. (225 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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