STRINGSTRING
Y1Q_0015289 Y1Q_0015289 Y1Q_0002887 Y1Q_0002887 VCL VCL Y1Q_0004916 Y1Q_0004916 CTNNA2-2 CTNNA2-2 CTNNAL1 CTNNAL1 CTNNA2 CTNNA2 Y1Q_0015287 Y1Q_0015287 Y1Q_0015290 Y1Q_0015290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0015289Uncharacterized protein. (128 aa)
Y1Q_0002887Uncharacterized protein. (454 aa)
VCLVinculin. (1066 aa)
Y1Q_0004916Uncharacterized protein. (383 aa)
CTNNA2-2Uncharacterized protein. (603 aa)
CTNNAL1Alpha-catulin isoform B. (769 aa)
CTNNA2Catenin alpha-2 isoform A. (939 aa)
Y1Q_0015287Uncharacterized protein. (282 aa)
Y1Q_0015290Uncharacterized protein. (143 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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