25 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CECR2	Cat eye syndrome critical region protein 2. (1469 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	CREBBPA	CREB-binding protein isoform A. (1756 aa)
	PBRM1	Protein polybromo-1 isoform A. (1589 aa)
	BAZ1B	Tyrosine-protein kinase BAZ1B. (1489 aa)
	MAPK13	Mitogen-activated protein kinase. (1546 aa)
	BPTF	Nucleosome-remodeling factor subunit BPTF. (2737 aa)
	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A. (1718 aa)
	PHIP	PH-interacting protein isoform B. (1788 aa)
	BRD3	Bromodomain-containing protein 3 isoform B. (789 aa)
	KAT2B	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (783 aa)
	BRD3A	Bromodomain-containing protein 3. (687 aa)
	BRWD1	Uncharacterized protein. (2471 aa)
	SMARCA2	Putative global transcription activator SNF2L2. (1430 aa)
	BRDT	Bromodomain testis-specific protein isoform B. (894 aa)
	BAZ2B	Bromodomain adjacent to zinc finger domain protein 2B. (2762 aa)
	ATAD2B-2	Bromo domain-containing protein. (1418 aa)
	BRD4	Bromodomain-containing protein 4 isoform B. (1369 aa)
	BRD1	Uncharacterized protein. (734 aa)
	DHX58	Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family. (1743 aa)
	SMARCA4	Uncharacterized protein. (1610 aa)
	TAF1	Transcription initiation factor TFIID subunit. (1966 aa)
	BRWD3	Uncharacterized protein. (1554 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A. (1581 aa)
	TRIM24-2	Uncharacterized protein. (951 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	CECR2	A0A151NKF5	A0A151NIJ3	Bromodomain adjacent to zinc finger domain protein 1A.	Cat eye syndrome critical region protein 2.	0.565
BAZ1B	CECR2	A0A151N9J8	A0A151NIJ3	Tyrosine-protein kinase BAZ1B.	Cat eye syndrome critical region protein 2.	0.443
BAZ1B	CREBBP	A0A151N9J8	A0A151NHH3	Tyrosine-protein kinase BAZ1B.	CREB-binding protein isoform C.	0.545
BAZ1B	CREBBPA	A0A151N9J8	A0A151NHE3	Tyrosine-protein kinase BAZ1B.	CREB-binding protein isoform A.	0.509
BAZ1B	DHX58	A0A151N9J8	A0A151PCM0	Tyrosine-protein kinase BAZ1B.	Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family.	0.527
BAZ1B	KAT2B	A0A151N9J8	A0A151MQU0	Tyrosine-protein kinase BAZ1B.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.527
BRD1	MAPK13	A0A151PFC5	A0A151N932	Uncharacterized protein.	Mitogen-activated protein kinase.	0.742
BRD3	TAF1	A0A151MRD0	A0A151NTA1	Bromodomain-containing protein 3 isoform B.	Transcription initiation factor TFIID subunit.	0.582
BRD3A	TAF1	A0A151MG60	A0A151NTA1	Bromodomain-containing protein 3.	Transcription initiation factor TFIID subunit.	0.582
BRD4	TAF1	A0A151PHI3	A0A151NTA1	Bromodomain-containing protein 4 isoform B.	Transcription initiation factor TFIID subunit.	0.582
BRDT	TAF1	A0A151M523	A0A151NTA1	Bromodomain testis-specific protein isoform B.	Transcription initiation factor TFIID subunit.	0.582
BRWD1	SMARCA2	A0A151MEB4	A0A151M8I6	Uncharacterized protein.	Putative global transcription activator SNF2L2.	0.480
BRWD1	SMARCA4	A0A151MEB4	A0A151NU66	Uncharacterized protein.	Uncharacterized protein.	0.480
BRWD1	TAF1	A0A151MEB4	A0A151NTA1	Uncharacterized protein.	Transcription initiation factor TFIID subunit.	0.580
BRWD3	SMARCA2	A0A151NNK5	A0A151M8I6	Uncharacterized protein.	Putative global transcription activator SNF2L2.	0.480
BRWD3	SMARCA4	A0A151NNK5	A0A151NU66	Uncharacterized protein.	Uncharacterized protein.	0.480
BRWD3	TAF1	A0A151NNK5	A0A151NTA1	Uncharacterized protein.	Transcription initiation factor TFIID subunit.	0.580
CECR2	BAZ1A	A0A151NIJ3	A0A151NKF5	Cat eye syndrome critical region protein 2.	Bromodomain adjacent to zinc finger domain protein 1A.	0.565
CECR2	BAZ1B	A0A151NIJ3	A0A151N9J8	Cat eye syndrome critical region protein 2.	Tyrosine-protein kinase BAZ1B.	0.443
CECR2	CREBBP	A0A151NIJ3	A0A151NHH3	Cat eye syndrome critical region protein 2.	CREB-binding protein isoform C.	0.517