64 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BRPF1	Uncharacterized protein. (1677 aa)
	PHF14	PHD finger protein 14 isoform B. (882 aa)
	PHF23-2	PHD finger protein 23. (71 aa)
	NFX1	Transcriptional repressor NF-X1 isoform D. (1366 aa)
	INTS12	Integrator complex subunit 12. (510 aa)
	CXXC1	CXXC-type zinc finger protein 1 isoform A. (628 aa)
	PHF19	PHD finger protein 19 isoform B. (588 aa)
	CHD3	Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
	ING4	Inhibitor of growth protein. (256 aa)
	TRIM66	Tripartite motif-containing protein 66 isoform A. (1181 aa)
	PHF21A	PHD finger protein 21A isoform D. (706 aa)
	PHF12	PHD finger protein 12. (591 aa)
	UHRF1	E3 ubiquitin-protein ligase UHRF1 isoform A. (818 aa)
	JADE1	Protein Jade-1 isoform B. (861 aa)
	Y1Q_0015733	Uncharacterized protein. (1382 aa)
	MTF2	Metal-response element-binding transcription factor 2. (595 aa)
	PHF10	PHD finger protein 10 isoform A. (472 aa)
	BAZ2B	Bromodomain adjacent to zinc finger domain protein 2B. (2762 aa)
	BAZ1B	Tyrosine-protein kinase BAZ1B. (1489 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3387 aa)
	ING3	Inhibitor of growth protein 3 isoform A. (402 aa)
	KMT2B	Histone-lysine N-methyltransferase 2B isoform A. (615 aa)
	JADE1-2	Uncharacterized protein. (687 aa)
	ABCF3	ATP-binding cassette sub-family F member 3. (1042 aa)
	ZMYND11	Zinc finger MYND domain-containing protein 11 isoform A. (643 aa)
	KMT2D	Histone-lysine N-methyltransferase 2D isoform C. (4340 aa)
	MLLT10-2	Protein AF-10. (1113 aa)
	ING2	Inhibitor of growth protein. (228 aa)
	NSD2	Uncharacterized protein. (1370 aa)
	MLLT10-1	Protein AF-10 isoform C. (1069 aa)
	TRIM28	Transcription intermediary factor 1-beta isoform C. (823 aa)
	UHRF1-2	Uncharacterized protein. (805 aa)
	Y1Q_0003629	Histone-lysine N-methyltransferase 2D-like. (492 aa)
	ZMYND8	Protein kinase C-binding protein 1 isoform A. (1197 aa)
	DIDO1	Death-inducer obliterator 1. (1960 aa)
	PHRF1	PHD and RING finger domain-containing protein 1. (1045 aa)
	JADE3	Uncharacterized protein. (1087 aa)
	ING1	Inhibitor of growth protein. (281 aa)
	PHF1	PHD finger protein 1 isoform B. (569 aa)
	KDM2B	Lysine-specific demethylase 2B isoform E. (938 aa)
	KDM7A	Lysine-specific demethylase 7A isoform B. (987 aa)
	TAF3	Transcription initiation factor TFIID subunit 3 isoform C. (1040 aa)
	KMT2D-2	Uncharacterized protein. (2572 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A. (1581 aa)
	KDM5A	Uncharacterized protein. (1692 aa)
	KDM7A-2	Uncharacterized protein. (919 aa)
	TRIM24-2	Uncharacterized protein. (951 aa)
	NSD3	Uncharacterized protein. (1430 aa)
	PYGO2	Pygopus-like protein 2. (371 aa)
	MAPK13	Mitogen-activated protein kinase. (1546 aa)
	KDM5B	Lysine-specific demethylase 5B isoform A. (1519 aa)
	PHF21B	PHD finger protein 21B isoform B. (547 aa)
	RSF1	Remodeling and spacing factor 1. (1444 aa)
	CHD3-2	Uncharacterized protein. (1966 aa)
	CHD5	Uncharacterized protein. (1864 aa)
	WHSC1	Histone-lysine N-methyltransferase NSD2. (764 aa)
	BPTF	Nucleosome-remodeling factor subunit BPTF. (2737 aa)
	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A. (1718 aa)
	FBXL19	F-box/LRR-repeat protein 19. (689 aa)
	DPF3-1	Zinc finger protein DPF3 isoform A. (378 aa)
	KDM2A	Lysine-specific demethylase 2A isoform B. (1229 aa)
	DPF2	Zinc finger protein ubi-d4. (391 aa)
	KAT6B	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1733 aa)
	PHF13	PHD finger protein 13 isoform B. (341 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	PHF21A	A0A151NKF5	A0A151MB70	Bromodomain adjacent to zinc finger domain protein 1A.	PHD finger protein 21A isoform D.	0.573
BAZ1B	CHD3	A0A151N9J8	A0A151MCQ8	Tyrosine-protein kinase BAZ1B.	Chromodomain-helicase-DNA-binding protein 3.	0.420
BAZ1B	CHD3-2	A0A151N9J8	A0A151N497	Tyrosine-protein kinase BAZ1B.	Uncharacterized protein.	0.420
BAZ1B	CHD5	A0A151N9J8	A0A151N3K5	Tyrosine-protein kinase BAZ1B.	Uncharacterized protein.	0.420
BAZ1B	RSF1	A0A151N9J8	A0A151N4U4	Tyrosine-protein kinase BAZ1B.	Remodeling and spacing factor 1.	0.406
BPTF	RSF1	A0A151N2C6	A0A151N4U4	Nucleosome-remodeling factor subunit BPTF.	Remodeling and spacing factor 1.	0.644
BRPF1	ING1	A0A151MRL3	A0A151NWY4	Uncharacterized protein.	Inhibitor of growth protein.	0.472
BRPF1	ING2	A0A151MRL3	A0A151PAK8	Uncharacterized protein.	Inhibitor of growth protein.	0.520
BRPF1	ING3	A0A151MRL3	A0A151PEU1	Uncharacterized protein.	Inhibitor of growth protein 3 isoform A.	0.520
BRPF1	ING4	A0A151MRL3	A0A151MCN0	Uncharacterized protein.	Inhibitor of growth protein.	0.886
BRPF1	KAT6B	A0A151MRL3	A0A151MSW9	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.794
BRPF1	MAPK13	A0A151MRL3	A0A151N932	Uncharacterized protein.	Mitogen-activated protein kinase.	0.623
CHD3	BAZ1B	A0A151MCQ8	A0A151N9J8	Chromodomain-helicase-DNA-binding protein 3.	Tyrosine-protein kinase BAZ1B.	0.420
CHD3	PHF21A	A0A151MCQ8	A0A151MB70	Chromodomain-helicase-DNA-binding protein 3.	PHD finger protein 21A isoform D.	0.458
CHD3	TRIM28	A0A151MCQ8	A0A151P436	Chromodomain-helicase-DNA-binding protein 3.	Transcription intermediary factor 1-beta isoform C.	0.418
CHD3-2	BAZ1B	A0A151N497	A0A151N9J8	Uncharacterized protein.	Tyrosine-protein kinase BAZ1B.	0.420
CHD3-2	PHF21A	A0A151N497	A0A151MB70	Uncharacterized protein.	PHD finger protein 21A isoform D.	0.458
CHD3-2	TRIM28	A0A151N497	A0A151P436	Uncharacterized protein.	Transcription intermediary factor 1-beta isoform C.	0.430
CHD5	BAZ1B	A0A151N3K5	A0A151N9J8	Uncharacterized protein.	Tyrosine-protein kinase BAZ1B.	0.420
CHD5	PHF21A	A0A151N3K5	A0A151MB70	Uncharacterized protein.	PHD finger protein 21A isoform D.	0.458