STRINGSTRING
FAU FAU NEDD8 NEDD8 UBL4A UBL4A UBFD1 UBFD1 KXD1 KXD1 SCARB1 SCARB1 USP14 USP14 RPS27A RPS27A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAU40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
NEDD8NEDD8. (79 aa)
UBL4AUbiquitin-like protein 4A. (158 aa)
UBFD1Ubiquitin domain-containing protein UBFD1. (260 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (492 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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