6 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HIF3A-1	Hypoxia-inducible factor 3-alpha isoform C. (374 aa)
	HIF1A	Uncharacterized protein. (747 aa)
	CREBBPA	CREB-binding protein isoform A. (1756 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	Y1Q_0024039	KIX domain-containing protein. (131 aa)
	EPAS1	Endothelial PAS domain-containing protein 1. (863 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	CREBBPA	A0A151NHH3	A0A151NHE3	CREB-binding protein isoform C.	CREB-binding protein isoform A.	0.952
CREBBP	EPAS1	A0A151NHH3	A0A151NWI5	CREB-binding protein isoform C.	Endothelial PAS domain-containing protein 1.	0.826
CREBBP	HIF1A	A0A151NHH3	A0A151N3U2	CREB-binding protein isoform C.	Uncharacterized protein.	0.780
CREBBP	HIF3A-1	A0A151NHH3	A0A151N2N6	CREB-binding protein isoform C.	Hypoxia-inducible factor 3-alpha isoform C.	0.877
CREBBPA	CREBBP	A0A151NHE3	A0A151NHH3	CREB-binding protein isoform A.	CREB-binding protein isoform C.	0.952
CREBBPA	EPAS1	A0A151NHE3	A0A151NWI5	CREB-binding protein isoform A.	Endothelial PAS domain-containing protein 1.	0.885
CREBBPA	HIF1A	A0A151NHE3	A0A151N3U2	CREB-binding protein isoform A.	Uncharacterized protein.	0.882
CREBBPA	HIF3A-1	A0A151NHE3	A0A151N2N6	CREB-binding protein isoform A.	Hypoxia-inducible factor 3-alpha isoform C.	0.882
CREBBPA	Y1Q_0024039	A0A151NHE3	A0A151NHX4	CREB-binding protein isoform A.	KIX domain-containing protein.	0.953
EPAS1	CREBBP	A0A151NWI5	A0A151NHH3	Endothelial PAS domain-containing protein 1.	CREB-binding protein isoform C.	0.826
EPAS1	CREBBPA	A0A151NWI5	A0A151NHE3	Endothelial PAS domain-containing protein 1.	CREB-binding protein isoform A.	0.885
EPAS1	HIF1A	A0A151NWI5	A0A151N3U2	Endothelial PAS domain-containing protein 1.	Uncharacterized protein.	0.754
EPAS1	HIF3A-1	A0A151NWI5	A0A151N2N6	Endothelial PAS domain-containing protein 1.	Hypoxia-inducible factor 3-alpha isoform C.	0.750
EPAS1	Y1Q_0024039	A0A151NWI5	A0A151NHX4	Endothelial PAS domain-containing protein 1.	KIX domain-containing protein.	0.826
HIF1A	CREBBP	A0A151N3U2	A0A151NHH3	Uncharacterized protein.	CREB-binding protein isoform C.	0.780
HIF1A	CREBBPA	A0A151N3U2	A0A151NHE3	Uncharacterized protein.	CREB-binding protein isoform A.	0.882
HIF1A	EPAS1	A0A151N3U2	A0A151NWI5	Uncharacterized protein.	Endothelial PAS domain-containing protein 1.	0.754
HIF1A	Y1Q_0024039	A0A151N3U2	A0A151NHX4	Uncharacterized protein.	KIX domain-containing protein.	0.780
HIF3A-1	CREBBP	A0A151N2N6	A0A151NHH3	Hypoxia-inducible factor 3-alpha isoform C.	CREB-binding protein isoform C.	0.877
HIF3A-1	CREBBPA	A0A151N2N6	A0A151NHE3	Hypoxia-inducible factor 3-alpha isoform C.	CREB-binding protein isoform A.	0.882