9 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y1Q_0010680	Uncharacterized protein. (176 aa)
	Y1Q_0022623	SWIM-type domain-containing protein. (573 aa)
	WWP1	E3 ubiquitin-protein ligase. (946 aa)
	ITCH-2	E3 ubiquitin-protein ligase. (832 aa)
	KXD1	KxDL motif-containing protein 1. (293 aa)
	Y1Q_0015649	Uncharacterized protein. (1191 aa)
	FNDC3A-2	Uncharacterized protein. (1195 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	FNDC3A	Fibronectin type-III domain-containing protein 3A. (1011 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNDC3A	Y1Q_0010680	A0A151MGC8	A0A151M6H1	Fibronectin type-III domain-containing protein 3A.	Uncharacterized protein.	0.908
ITCH-2	KXD1	A0A151P019	A0A151NUA6	E3 ubiquitin-protein ligase.	KxDL motif-containing protein 1.	0.884
ITCH-2	RPS27A	A0A151P019	A0A151MGG2	E3 ubiquitin-protein ligase.	Ubiquitin-40S ribosomal protein S27a.	0.927
ITCH-2	WWP1	A0A151P019	A0A151PH26	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.783
KXD1	ITCH-2	A0A151NUA6	A0A151P019	KxDL motif-containing protein 1.	E3 ubiquitin-protein ligase.	0.884
KXD1	RPS27A	A0A151NUA6	A0A151MGG2	KxDL motif-containing protein 1.	Ubiquitin-40S ribosomal protein S27a.	0.999
KXD1	WWP1	A0A151NUA6	A0A151PH26	KxDL motif-containing protein 1.	E3 ubiquitin-protein ligase.	0.884
KXD1	Y1Q_0022623	A0A151NUA6	A0A151PHD6	KxDL motif-containing protein 1.	SWIM-type domain-containing protein.	0.408
RPS27A	ITCH-2	A0A151MGG2	A0A151P019	Ubiquitin-40S ribosomal protein S27a.	E3 ubiquitin-protein ligase.	0.927
RPS27A	KXD1	A0A151MGG2	A0A151NUA6	Ubiquitin-40S ribosomal protein S27a.	KxDL motif-containing protein 1.	0.999
RPS27A	WWP1	A0A151MGG2	A0A151PH26	Ubiquitin-40S ribosomal protein S27a.	E3 ubiquitin-protein ligase.	0.794
WWP1	ITCH-2	A0A151PH26	A0A151P019	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.783
WWP1	KXD1	A0A151PH26	A0A151NUA6	E3 ubiquitin-protein ligase.	KxDL motif-containing protein 1.	0.884
WWP1	RPS27A	A0A151PH26	A0A151MGG2	E3 ubiquitin-protein ligase.	Ubiquitin-40S ribosomal protein S27a.	0.794
Y1Q_0010680	FNDC3A	A0A151M6H1	A0A151MGC8	Uncharacterized protein.	Fibronectin type-III domain-containing protein 3A.	0.908
Y1Q_0022623	KXD1	A0A151PHD6	A0A151NUA6	SWIM-type domain-containing protein.	KxDL motif-containing protein 1.	0.408