STRINGSTRING
KXD1 KXD1 ZBP1 ZBP1 TRIM56 TRIM56 RPS27A RPS27A TMEM173 TMEM173 DDX41 DDX41 IRF3 IRF3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KXD1KxDL motif-containing protein 1. (293 aa)
ZBP1Z-DNA-binding protein 1. (436 aa)
TRIM56E3 ubiquitin-protein ligase TRIM56. (682 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
TMEM173Stimulator of interferon genes protein. (403 aa)
DDX41Putative ATP-dependent RNA helicase DDX41. (496 aa)
IRF3Interferon regulatory factor 3 isoform B. (462 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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