STRINGSTRING
RCOR2 RCOR2 SAP18 SAP18 HDAC8 HDAC8 RCOR1 RCOR1 SAP30 SAP30 ZMPSTE24 ZMPSTE24 GATAD2B GATAD2B ARID4A ARID4A Y1Q_0014762 Y1Q_0014762 ARID4B ARID4B HDAC2 HDAC2 MTA2 MTA2 HMG20A-1 HMG20A-1 PHF21A PHF21A CHD3 CHD3 GATAD2A GATAD2A RBBP4-2 RBBP4-2 HDAC1 HDAC1 REST REST RCOR3 RCOR3 RBBP4 RBBP4 CHD5 CHD5 CHD3-2 CHD3-2 SUDS3 SUDS3 PHF21B PHF21B HMG20B HMG20B BRMS1L BRMS1L WDR73-1 WDR73-1 MTA1-2 MTA1-2 AIRE AIRE WDR26 WDR26 MTA1 MTA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOR2REST corepressor 2. (424 aa)
SAP18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
HDAC8Histone deacetylase 8. (366 aa)
RCOR1REST corepressor 1. (382 aa)
SAP30Histone deacetylase complex subunit SAP30. (124 aa)
ZMPSTE24CAAX prenyl protease 1-like protein. (1233 aa)
GATAD2BTranscriptional repressor p66-beta isoform B. (634 aa)
ARID4AAT-rich interactive domain-containing protein 4A isoform A. (951 aa)
Y1Q_0014762Tudor domain-containing protein. (305 aa)
ARID4BAT-rich interactive domain-containing protein 4B isoform B. (1316 aa)
HDAC2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (488 aa)
MTA2Uncharacterized protein. (676 aa)
HMG20A-1High mobility group protein 20A isoform A. (372 aa)
PHF21APHD finger protein 21A isoform D. (706 aa)
CHD3Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
GATAD2ATranscriptional repressor p66-alpha isoform C. (621 aa)
RBBP4-2WD_REPEATS_REGION domain-containing protein. (425 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (464 aa)
RESTRE1-silencing transcription factor. (913 aa)
RCOR3REST corepressor 3 isoform A. (604 aa)
RBBP4Histone-binding protein RBBP4. (424 aa)
CHD5Uncharacterized protein. (1864 aa)
CHD3-2Uncharacterized protein. (1966 aa)
SUDS3Sin3 histone deacetylase corepressor complex component SDS3. (336 aa)
PHF21BPHD finger protein 21B isoform B. (547 aa)
HMG20BHigh mobility group 20B. (319 aa)
BRMS1LBreast cancer metastasis-suppressor 1-like protein. (323 aa)
WDR73-1WD repeat-containing protein 73 isoform A. (359 aa)
MTA1-2Uncharacterized protein. (694 aa)
AIREAutoimmune regulator isoform B. (519 aa)
WDR26WD repeat-containing protein 26 isoform A. (574 aa)
MTA1Metastasis-associated protein MTA1. (590 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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