STRINGSTRING
SPATA5 SPATA5 MARCH6 MARCH6 PDIA3 PDIA3 KXD1 KXD1 UGGT1 UGGT1 GANAB GANAB PDIA4 PDIA4 Y1Q_0020709 Y1Q_0020709 PSMC1 PSMC1 RNF103 RNF103 MARCH1 MARCH1 VCP VCP SCARB1 SCARB1 UGGT2 UGGT2 UBXN1 UBXN1 MARCH11 MARCH11 CLGN-2 CLGN-2 MARCH2 MARCH2 Y1Q_0018101 Y1Q_0018101 Y1Q_0017145 Y1Q_0017145 Y1Q_0017120 Y1Q_0017120 Y1Q_0023183 Y1Q_0023183 RNF139 RNF139 DERL1 DERL1 ENGASE ENGASE MOGS MOGS NGLY1 NGLY1 TRIM55 TRIM55 CALR CALR MARCH8-1 MARCH8-1 EDEM1 EDEM1 EDEM3 EDEM3 RPS27A RPS27A Y1Q_0005598 Y1Q_0005598 MAN1B1 MAN1B1 SPATA5L1 SPATA5L1 MARCH3-1 MARCH3-1 CLGN CLGN MARCH9 MARCH9 TRIM54 TRIM54 MARCH4 MARCH4 MARCH7 MARCH7 MARCH10 MARCH10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPATA5Spermatogenesis-associated protein 5. (871 aa)
MARCH6E3 ubiquitin-protein ligase MARCH6 isoform B. (839 aa)
PDIA3Protein disulfide-isomerase. (450 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
UGGT1UDP-glucose:glycoprotein glucosyltransferase 1 isoform A. (1595 aa)
GANABUncharacterized protein. (280 aa)
PDIA4Protein disulfide-isomerase. (669 aa)
Y1Q_0020709Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (229 aa)
PSMC126S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
RNF103E3 ubiquitin-protein ligase RNF103. (314 aa)
MARCH1E3 ubiquitin-protein ligase MARCH1. (287 aa)
VCPUncharacterized protein; Belongs to the AAA ATPase family. (880 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
UGGT2Uncharacterized protein. (1490 aa)
UBXN1UBX domain-containing protein 1. (320 aa)
MARCH11Uncharacterized protein. (105 aa)
CLGN-2Uncharacterized protein. (665 aa)
MARCH2E3 ubiquitin-protein ligase MARCH2. (246 aa)
Y1Q_0018101F-box/LRR-repeat protein 16-like. (543 aa)
Y1Q_0017145Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (482 aa)
Y1Q_0017120RING-type domain-containing protein. (150 aa)
Y1Q_0023183Uncharacterized protein. (431 aa)
RNF139Uncharacterized protein. (83 aa)
DERL1Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (252 aa)
ENGASECytosolic endo-beta-N-acetylglucosaminidase. (922 aa)
MOGSMannosyl-oligosaccharide glucosidase. (369 aa)
NGLY1Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase. (649 aa)
TRIM55Tripartite motif-containing protein 55 isoform A. (512 aa)
CALRCalreticulin. (356 aa)
MARCH8-1E3 ubiquitin-protein ligase MARCH8 isoform A. (601 aa)
EDEM1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (516 aa)
EDEM3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (857 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
Y1Q_0005598alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (822 aa)
MAN1B1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (668 aa)
SPATA5L1Spermatogenesis-associated protein 5-like protein 1. (763 aa)
MARCH3-1E3 ubiquitin-protein ligase MARCH3 isoform B. (232 aa)
CLGNCalmegin. (1443 aa)
MARCH9E3 ubiquitin-protein ligase MARCH9. (327 aa)
TRIM54Tripartite motif-containing protein 54. (187 aa)
MARCH4E3 ubiquitin-protein ligase MARCH4. (281 aa)
MARCH7E3 ubiquitin-protein ligase MARCH7. (590 aa)
MARCH10Putative E3 ubiquitin-protein ligase MARCH10. (344 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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