STRINGSTRING
RBCK1 RBCK1 BIRC7-1 BIRC7-1 BIRC2 BIRC2 CYLDL CYLDL OTUD1 OTUD1 IKBKB IKBKB Y1Q_0004030 Y1Q_0004030 NAIP NAIP USP2 USP2 Y1Q_0021018 Y1Q_0021018 TNFAIP3 TNFAIP3 USP21 USP21 TNFSF10 TNFSF10 TNFRSF1A TNFRSF1A TRAF2 TRAF2 TRAF1-1 TRAF1-1 RPS27A RPS27A Y1Q_0020784 Y1Q_0020784 TRADD TRADD CYLD CYLD MAP3K7 MAP3K7 GNB2L1 GNB2L1 Y1Q_0010566 Y1Q_0010566 SHRPRBCK1R SHRPRBCK1R Y1Q_0013741 Y1Q_0013741 IKBKB-2 IKBKB-2 RIPK1 RIPK1 TAB1 TAB1 RNF31 RNF31 XIAP XIAP OPTN OPTN Y1Q_0002396 Y1Q_0002396 KXD1 KXD1 TAB3 TAB3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBCK1RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform B. (521 aa)
BIRC7-1Baculoviral IAP repeat-containing protein 7 isoform A. (309 aa)
BIRC2Inhibitor of apoptosis protein. (493 aa)
CYLDLUbiquitin carboxyl-terminal hydrolase CYLD-like; Belongs to the peptidase C19 family. (788 aa)
OTUD1OTU domain-containing protein 1. (325 aa)
IKBKBInhibitor of nuclear factor kappa-B kinase subunit beta. (730 aa)
Y1Q_0004030Uncharacterized protein. (147 aa)
NAIPBaculoviral IAP repeat-containing protein 1 isoform A. (878 aa)
USP2USP domain-containing protein. (105 aa)
Y1Q_0021018RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (176 aa)
TNFAIP3Tumor necrosis factor alpha-induced protein 3. (853 aa)
USP21Ubiquitin carboxyl-terminal hydrolase. (458 aa)
TNFSF10Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (295 aa)
TNFRSF1ATumor necrosis factor receptor superfamily member 1A. (412 aa)
TRAF2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (601 aa)
TRAF1-1TNF receptor-associated factor 1 isoform C. (723 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
Y1Q_0020784Ubiquitin carboxyl-terminal hydrolase 2-like. (253 aa)
TRADDTumor necrosis factor receptor type 1-associated DEATH domain protein. (336 aa)
CYLDUncharacterized protein. (949 aa)
MAP3K7Mitogen-activated protein kinase kinase kinase 7 isoform A. (610 aa)
GNB2L1Guanine nucleotide-binding protein subunit beta-2-like 1. (317 aa)
Y1Q_0010566RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (155 aa)
SHRPRBCK1RRanBP-type and C3HC4-type zinc finger-containing protein 1 isoform A. (480 aa)
Y1Q_0013741Ubiquitin carboxyl-terminal hydrolase 2-like; Belongs to the peptidase C19 family. (179 aa)
IKBKB-2Uncharacterized protein. (757 aa)
RIPK1Receptor-interacting serine/threonine-protein kinase 1. (699 aa)
TAB1TGF-beta-activated kinase 1 and MAP3K7-binding protein 1. (502 aa)
RNF31E3 ubiquitin-protein ligase RNF31. (955 aa)
XIAPE3 ubiquitin-protein ligase XIAP. (558 aa)
OPTNOptineurin. (546 aa)
Y1Q_0002396USP domain-containing protein; Belongs to the peptidase C19 family. (85 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
TAB3TGF-beta-activated kinase 1 and MAP3K7-binding protein 3. (368 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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