51 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMC4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (460 aa)
	PSMA3	Proteasome subunit alpha type. (256 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (281 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
	CSNK1A1	Casein kinase I isoform C; Belongs to the protein kinase superfamily. (365 aa)
	HYKK	Proteasome endopeptidase complex. (600 aa)
	PSMC3	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (404 aa)
	PSMA1	Proteasome subunit alpha type. (261 aa)
	GSK3B-2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (433 aa)
	PSMD5-1	26S proteasome non-ATPase regulatory subunit 5 isoform B. (837 aa)
	PSMB7	Proteasome subunit beta. (274 aa)
	PSME4	Proteasome activator complex subunit 4. (1808 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6. (348 aa)
	BTRC	F-box/WD repeat-containing protein 1A isoform B. (626 aa)
	PSMB8	Proteasome subunit beta. (282 aa)
	PSMB9	Proteasome subunit beta. (216 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
	Y1Q_0005128	Proteasome subunit beta. (277 aa)
	GSK3B	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (413 aa)
	PSMD12	26S proteasome non-ATPase regulatory subunit 12. (441 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMC5	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (411 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (104 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta isoform C; Belongs to the protein kinase superfamily. (368 aa)
	PSMA6	Proteasome subunit alpha type. (252 aa)
	Y1Q_0006499	Uncharacterized protein; Belongs to the protein kinase superfamily. (401 aa)
	PSME2	Proteasome activator complex subunit 2. (242 aa)
	PSME1	Proteasome activator complex subunit 1. (150 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)
	PSMD7	26S proteasome non-ATPase regulatory subunit 7. (322 aa)
	PSMC2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
	PSMB11	Proteasome subunit beta. (261 aa)
	PSMB5	Proteasome subunit beta type-5. (211 aa)
	PSMD9-1	26S proteasome non-ATPase regulatory subunit 9 isoform B. (205 aa)
	PSMB6	Proteasome subunit beta. (227 aa)
	KXD1	KxDL motif-containing protein 1. (293 aa)
	SUFU	Suppressor of fused homolog. (469 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13. (376 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	GLI3	Uncharacterized protein. (1572 aa)
	PSMF1	Proteasome inhibitor PI31 subunit. (273 aa)
	CUL1	Cullin-1; Belongs to the cullin family. (776 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (521 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (518 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (257 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CSNK1A1	A0A151MLH5	A0A151M6R7	F-box/WD repeat-containing protein 1A isoform B.	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	0.553
BTRC	CUL1	A0A151MLH5	A0A151P2L7	F-box/WD repeat-containing protein 1A isoform B.	Cullin-1; Belongs to the cullin family.	0.995
BTRC	GLI3	A0A151MLH5	A0A151P270	F-box/WD repeat-containing protein 1A isoform B.	Uncharacterized protein.	0.594
BTRC	GSK3B	A0A151MLH5	A0A151N132	F-box/WD repeat-containing protein 1A isoform B.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.854
BTRC	GSK3B-2	A0A151MLH5	A0A151MD62	F-box/WD repeat-containing protein 1A isoform B.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.854
BTRC	KXD1	A0A151MLH5	A0A151NUA6	F-box/WD repeat-containing protein 1A isoform B.	KxDL motif-containing protein 1.	0.766
BTRC	PSMD14	A0A151MLH5	A0A151M0E7	F-box/WD repeat-containing protein 1A isoform B.	26S proteasome non-ATPase regulatory subunit 14.	0.523
BTRC	RBX1	A0A151MLH5	A0A151NHM4	F-box/WD repeat-containing protein 1A isoform B.	E3 ubiquitin-protein ligase RBX1.	0.976
BTRC	RPS27A	A0A151MLH5	A0A151MGG2	F-box/WD repeat-containing protein 1A isoform B.	Ubiquitin-40S ribosomal protein S27a.	0.768
CSNK1A1	BTRC	A0A151M6R7	A0A151MLH5	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	F-box/WD repeat-containing protein 1A isoform B.	0.553
CSNK1A1	CUL1	A0A151M6R7	A0A151P2L7	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Cullin-1; Belongs to the cullin family.	0.713
CSNK1A1	GLI3	A0A151M6R7	A0A151P270	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.689
CSNK1A1	GSK3B	A0A151M6R7	A0A151N132	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.798
CSNK1A1	GSK3B-2	A0A151M6R7	A0A151MD62	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.798
CSNK1A1	HYKK	A0A151M6R7	A0A151M9X3	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Proteasome endopeptidase complex.	0.551
CSNK1A1	PRKACB	A0A151M6R7	A0A151NJ28	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase catalytic subunit beta isoform C; Belongs to the protein kinase superfamily.	0.926
CSNK1A1	PSMA1	A0A151M6R7	A0A151MC38	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Proteasome subunit alpha type.	0.553
CSNK1A1	PSMA5	A0A151M6R7	A0A151N9J3	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Proteasome subunit alpha type.	0.562
CSNK1A1	PSMA7	A0A151M6R7	A0A151NZD8	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Proteasome subunit alpha type.	0.514
CSNK1A1	PSMB11	A0A151M6R7	A0A151NQC6	Casein kinase I isoform C; Belongs to the protein kinase superfamily.	Proteasome subunit beta.	0.419