STRINGSTRING
Y1Q_0019892 Y1Q_0019892 PSMD14 PSMD14 MBD5-1 MBD5-1 PSMA3 PSMA3 INO80C-1 INO80C-1 TFPT TFPT PSMB4 PSMB4 PSMD4 PSMD4 Y1Q_0020684 Y1Q_0020684 NEDD8 NEDD8 HYKK HYKK PSMC3 PSMC3 PSMA1 PSMA1 BAP1 BAP1 PSMD5-1 PSMD5-1 PSMB7 PSMB7 PSME4 PSME4 RPS27A RPS27A UCHL5 UCHL5 RUVBL1 RUVBL1 PSMD6 PSMD6 PSMB8 PSMB8 PSMB9 PSMB9 Y1Q_0003900 Y1Q_0003900 ASXL3 ASXL3 KDM1B KDM1B ASXL2-1 ASXL2-1 INO80 INO80 KIF16B KIF16B WBP1 WBP1 HCFC1 HCFC1 ACTR8 ACTR8 PSMD1 PSMD1 Y1Q_0005128 Y1Q_0005128 FOXK1 FOXK1 CEP112 CEP112 PSMD12 PSMD12 Y1Q_0008616 Y1Q_0008616 INO80D INO80D PSMA5 PSMA5 PSMC5 PSMC5 BARD1 BARD1 ANKRD12 ANKRD12 NFRKB NFRKB PSMC4 PSMC4 HCFC2 HCFC2 PRRT4 PRRT4 TTC6 TTC6 PSMA6 PSMA6 UCHL3-1 UCHL3-1 PSME2 PSME2 PSME1 PSME1 PSMD10 PSMD10 PSMD7 PSMD7 PSMC2 PSMC2 PSMB11 PSMB11 PSMB5 PSMB5 PSMD9-1 PSMD9-1 SCARB1 SCARB1 OGT OGT PSMB6 PSMB6 KXD1 KXD1 FOXK2 FOXK2 INO80E INO80E Y1Q_0016713 Y1Q_0016713 PSMD13 PSMD13 PSMA7 PSMA7 ACTR5 ACTR5 ADRM1 ADRM1 PSMF1 PSMF1 MCRS1 MCRS1 ANKRD11 ANKRD11 PSMD3 PSMD3 PSMB3 PSMB3 YY1 YY1 PSMC1 PSMC1 FOXN3 FOXN3 UCHL1 UCHL1 PSMD11 PSMD11 PSMC6 PSMC6 RPAP3 RPAP3 PSMB2 PSMB2 ANKRD31-1 ANKRD31-1 PSMD8 PSMD8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0019892Uncharacterized protein. (487 aa)
PSMD1426S proteasome non-ATPase regulatory subunit 14. (460 aa)
MBD5-1Methyl-CpG-binding domain protein 5 isoform B. (985 aa)
PSMA3Proteasome subunit alpha type. (256 aa)
INO80C-1INO80 complex subunit C isoform A. (188 aa)
TFPTTCF3 fusion partner. (251 aa)
PSMB4Proteasome subunit beta; Belongs to the peptidase T1B family. (281 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
Y1Q_0020684Host cell factor 1-like. (87 aa)
NEDD8NEDD8. (79 aa)
HYKKProteasome endopeptidase complex. (600 aa)
PSMC326S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (404 aa)
PSMA1Proteasome subunit alpha type. (261 aa)
BAP1Ubiquitin carboxyl-terminal hydrolase. (728 aa)
PSMD5-126S proteasome non-ATPase regulatory subunit 5 isoform B. (837 aa)
PSMB7Proteasome subunit beta. (274 aa)
PSME4Proteasome activator complex subunit 4. (1808 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase. (314 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
PSMD626S proteasome non-ATPase regulatory subunit 6. (348 aa)
PSMB8Proteasome subunit beta. (282 aa)
PSMB9Proteasome subunit beta. (216 aa)
Y1Q_0003900HARE-HTH domain-containing protein. (66 aa)
ASXL3Putative Polycomb group protein ASXL3. (942 aa)
KDM1BLysine-specific histone demethylase 1B. (821 aa)
ASXL2-1Putative Polycomb group protein ASXL2 isoform B. (1144 aa)
INO80DNA helicase INO80. (1539 aa)
KIF16BKinesin-like protein KIF16B isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2784 aa)
WBP1WW domain-binding protein 1. (549 aa)
HCFC1Host cell factor 1. (1697 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
Y1Q_0005128Proteasome subunit beta. (277 aa)
FOXK1Forkhead box protein K1. (598 aa)
CEP112Centrosomal protein of. (975 aa)
PSMD1226S proteasome non-ATPase regulatory subunit 12. (441 aa)
Y1Q_0008616HSA domain-containing protein. (1301 aa)
INO80DINO80 complex subunit D. (1029 aa)
PSMA5Proteasome subunit alpha type. (241 aa)
PSMC5Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (411 aa)
BARD1BRCA1-associated RING domain protein 1 isoform B. (792 aa)
ANKRD12Ankyrin repeat domain-containing protein 12. (761 aa)
NFRKBNuclear factor related to kappa-B-binding protein isoform B. (1254 aa)
PSMC426S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
HCFC2Host cell factor 2 isoform A. (809 aa)
PRRT4Proline-rich transmembrane protein 4. (482 aa)
TTC6Tetratricopeptide repeat protein 6 isoform C. (1556 aa)
PSMA6Proteasome subunit alpha type. (252 aa)
UCHL3-1Ubiquitin carboxyl-terminal hydrolase. (239 aa)
PSME2Proteasome activator complex subunit 2. (242 aa)
PSME1Proteasome activator complex subunit 1. (150 aa)
PSMD1026S proteasome non-ATPase regulatory subunit 10. (226 aa)
PSMD726S proteasome non-ATPase regulatory subunit 7. (322 aa)
PSMC226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
PSMB11Proteasome subunit beta. (261 aa)
PSMB5Proteasome subunit beta type-5. (211 aa)
PSMD9-126S proteasome non-ATPase regulatory subunit 9 isoform B. (205 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
OGTUDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase subunit isoform B. (1075 aa)
PSMB6Proteasome subunit beta. (227 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
FOXK2Forkhead box protein K2. (562 aa)
INO80EINO80 complex subunit E isoform A. (253 aa)
Y1Q_0016713Uncharacterized protein. (252 aa)
PSMD1326S proteasome non-ATPase regulatory subunit 13. (376 aa)
PSMA7Proteasome subunit alpha type. (248 aa)
ACTR5Actin-related protein 5; Belongs to the actin family. (557 aa)
ADRM1Proteasomal ubiquitin receptor ADRM1. (405 aa)
PSMF1Proteasome inhibitor PI31 subunit. (273 aa)
MCRS1Microspherule protein 1. (491 aa)
ANKRD11Ankyrin repeat domain-containing protein 11. (2899 aa)
PSMD326S proteasome non-ATPase regulatory subunit 3. (521 aa)
PSMB3Proteasome subunit beta. (205 aa)
YY1Transcriptional repressor protein YY1. (243 aa)
PSMC126S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
FOXN3Forkhead box protein N3 isoform A. (485 aa)
UCHL1Ubiquitin carboxyl-terminal hydrolase. (223 aa)
PSMD1126S proteasome non-ATPase regulatory subunit 11. (518 aa)
PSMC626S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
RPAP3RNA polymerase II-associated protein 3. (652 aa)
PSMB2Proteasome subunit beta. (201 aa)
ANKRD31-1Putative ankyrin repeat domain-containing protein 31 isoform C. (1142 aa)
PSMD826S proteasome non-ATPase regulatory subunit 8. (257 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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