STRINGSTRING
RRAGD RRAGD PSMC4 PSMC4 CBX7-1 CBX7-1 CBX6 CBX6 NPTXR NPTXR MKRN1 MKRN1 PSMA6 PSMA6 Y1Q_0007014 Y1Q_0007014 PSME2 PSME2 EED EED PSME1 PSME1 LAMTOR3 LAMTOR3 PSMD10 PSMD10 XIAP XIAP ITCH ITCH PSMD7 PSMD7 PSMC2 PSMC2 PSMB11 PSMB11 PSMB5 PSMB5 MAF1 MAF1 CSNK2B CSNK2B CBX8 CBX8 CBX4 CBX4 CBX2 CBX2 PSMD9-1 PSMD9-1 SCARB1 SCARB1 MTA1-2 MTA1-2 Y1Q_0018793 Y1Q_0018793 PSMB6 PSMB6 AIRE AIRE MLST8 MLST8 CSNK2A1 CSNK2A1 PSMD13 PSMD13 LAMTOR2 LAMTOR2 MKRN4 MKRN4 RHEBL1 RHEBL1 PSMA7 PSMA7 AKT3-2 AKT3-2 TNKS2 TNKS2 SNAI1 SNAI1 SALL4 SALL4 EZH2 EZH2 PSMF1 PSMF1 MTA1 MTA1 RPTOR RPTOR PSMD3 PSMD3 PSMB3 PSMB3 Y1Q_0010995 Y1Q_0010995 PHC1 PHC1 RRAGB RRAGB PSMC1 PSMC1 GUF1 GUF1 EZH1 EZH1 PSMD11 PSMD11 Y1Q_0017424 Y1Q_0017424 RHEB RHEB CRYGN CRYGN PSMC6 PSMC6 PSMB2 PSMB2 SCMH1 SCMH1 MKRN2 MKRN2 GATAD2B GATAD2B PHC2 PHC2 LAMTOR1 LAMTOR1 PSMD8 PSMD8 RNF2 RNF2 OTUD3-1 OTUD3-1 PSMD6 PSMD6 PSMB8 PSMB8 PSMB9 PSMB9 GATAD2A GATAD2A RBBP4-2 RBBP4-2 SNAI2 SNAI2 TNKS TNKS AKT2 AKT2 CSNK2A2 CSNK2A2 RRAGD-2 RRAGD-2 SLC38A9 SLC38A9 OTUD4 OTUD4 TRIM7 TRIM7 PSMD1 PSMD1 Y1Q_0005128 Y1Q_0005128 SALL2 SALL2 PHC2L PHC2L SCML2 SCML2 RBBP4 RBBP4 USP7 USP7 TXNDC11 TXNDC11 NPTX2 NPTX2 PSMD12 PSMD12 SUZ12 SUZ12 CHD5 CHD5 MTOR MTOR RERE RERE CHD3-2 CHD3-2 Y1Q_0012818 Y1Q_0012818 STUB1 STUB1 TRIM7.2 TRIM7.2 PSMD14 PSMD14 PSMA3 PSMA3 AKT3 AKT3 FRK FRK MTA2 MTA2 PSMB4 PSMB4 PSMD4 PSMD4 USP5 USP5 HYKK HYKK PML PML PSMC3 PSMC3 RNF141 RNF141 PSMA1 PSMA1 LAMTOR4 LAMTOR4 ATN1 ATN1 CHD3 CHD3 PSMD5-1 PSMD5-1 PSMB7 PSMB7 PSME4 PSME4 RPS27A RPS27A RING1 RING1 LAMTOR5 LAMTOR5 Y1Q_0002517 Y1Q_0002517 PSMA5 PSMA5 PSMC5 PSMC5 MECOM MECOM PHC3 PHC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RRAGDRas-related GTP-binding protein D. (333 aa)
PSMC426S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
CBX7-1Chromobox protein-like protein 7 isoform B. (252 aa)
CBX6Chromobox protein-like protein 6 isoform A. (427 aa)
NPTXRNeuronal pentraxin receptor. (502 aa)
MKRN1E3 ubiquitin-protein ligase makorin-1. (471 aa)
PSMA6Proteasome subunit alpha type. (252 aa)
Y1Q_0007014Repressor of RNA polymerase III transcription MAF1-like protein. (88 aa)
PSME2Proteasome activator complex subunit 2. (242 aa)
EEDPolycomb protein EED. (427 aa)
PSME1Proteasome activator complex subunit 1. (150 aa)
LAMTOR3Ragulator complex protein LAMTOR3. (124 aa)
PSMD1026S proteasome non-ATPase regulatory subunit 10. (226 aa)
XIAPE3 ubiquitin-protein ligase XIAP. (558 aa)
ITCHE3 ubiquitin-protein ligase. (894 aa)
PSMD726S proteasome non-ATPase regulatory subunit 7. (322 aa)
PSMC226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
PSMB11Proteasome subunit beta. (261 aa)
PSMB5Proteasome subunit beta type-5. (211 aa)
MAF1Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (246 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (249 aa)
CBX8Chromobox protein-like protein 8. (366 aa)
CBX4E3 SUMO-protein ligase CBX4. (456 aa)
CBX2Chromobox protein-like protein 2. (350 aa)
PSMD9-126S proteasome non-ATPase regulatory subunit 9 isoform B. (205 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
MTA1-2Uncharacterized protein. (694 aa)
Y1Q_0018793Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (2196 aa)
PSMB6Proteasome subunit beta. (227 aa)
AIREAutoimmune regulator isoform B. (519 aa)
MLST8Target of rapamycin complex subunit LST8. (403 aa)
CSNK2A1Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (435 aa)
PSMD1326S proteasome non-ATPase regulatory subunit 13. (376 aa)
LAMTOR2Ragulator complex protein LAMTOR2. (173 aa)
MKRN4Makorin, ring finger protein, 4. (352 aa)
RHEBL1GTPase RhebL1. (184 aa)
PSMA7Proteasome subunit alpha type. (248 aa)
AKT3-2Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
TNKS2Poly [ADP-ribose] polymerase. (1141 aa)
SNAI1Zinc finger protein SNAI1. (420 aa)
SALL4Sal-like protein 4. (1108 aa)
EZH2Histone-lysine N-methyltransferase EZH2 isoform A. (806 aa)
PSMF1Proteasome inhibitor PI31 subunit. (273 aa)
MTA1Metastasis-associated protein MTA1. (590 aa)
RPTORRegulatory-associated protein of mTOR isoform A. (1352 aa)
PSMD326S proteasome non-ATPase regulatory subunit 3. (521 aa)
PSMB3Proteasome subunit beta. (205 aa)
Y1Q_0010995Neuronal pentraxin-1-like. (527 aa)
PHC1Polyhomeotic-like protein 1 isoform A. (688 aa)
RRAGBRas-related GTP-binding protein A. (327 aa)
PSMC126S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (658 aa)
EZH1Uncharacterized protein. (751 aa)
PSMD1126S proteasome non-ATPase regulatory subunit 11. (518 aa)
Y1Q_0017424Uncharacterized protein. (235 aa)
RHEBGTP-binding protein Rheb. (184 aa)
CRYGNGamma-crystallin N; Belongs to the beta/gamma-crystallin family. (177 aa)
PSMC626S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
PSMB2Proteasome subunit beta. (201 aa)
SCMH1Polycomb protein SCMH1 isoform A. (709 aa)
MKRN2Putative E3 ubiquitin-protein ligase makorin-2. (380 aa)
GATAD2BTranscriptional repressor p66-beta isoform B. (634 aa)
PHC2Polyhomeotic-like protein 2 isoform A. (324 aa)
LAMTOR1Ragulator complex protein LAMTOR1. (161 aa)
PSMD826S proteasome non-ATPase regulatory subunit 8. (257 aa)
RNF2E3 ubiquitin-protein ligase RING2 isoform B. (404 aa)
OTUD3-1OTU domain-containing protein 3 isoform B. (433 aa)
PSMD626S proteasome non-ATPase regulatory subunit 6. (348 aa)
PSMB8Proteasome subunit beta. (282 aa)
PSMB9Proteasome subunit beta. (216 aa)
GATAD2ATranscriptional repressor p66-alpha isoform C. (621 aa)
RBBP4-2WD_REPEATS_REGION domain-containing protein. (425 aa)
SNAI2Zinc finger protein SNAI2. (268 aa)
TNKSPoly [ADP-ribose] polymerase. (1256 aa)
AKT2Non-specific serine/threonine protein kinase. (270 aa)
CSNK2A2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (392 aa)
RRAGD-2Uncharacterized protein. (410 aa)
SLC38A9Sodium-coupled neutral amino acid transporter 9. (561 aa)
OTUD4OTU domain-containing protein 4. (1000 aa)
TRIM7Tripartite motif-containing protein 7 isoform B. (519 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
Y1Q_0005128Proteasome subunit beta. (277 aa)
SALL2Sal-like protein 2. (343 aa)
PHC2LPolyhomeotic-like protein 2 isoform B. (525 aa)
SCML2SAM domain-containing protein. (805 aa)
RBBP4Histone-binding protein RBBP4. (424 aa)
USP7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1080 aa)
TXNDC11Thioredoxin domain-containing protein 11. (901 aa)
NPTX2Neuronal pentraxin-2. (347 aa)
PSMD1226S proteasome non-ATPase regulatory subunit 12. (441 aa)
SUZ12Polycomb protein SUZ12. (667 aa)
CHD5Uncharacterized protein. (1864 aa)
MTORSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2538 aa)
REREArginine-glutamic acid dipeptide repeats protein isoform A. (1134 aa)
CHD3-2Uncharacterized protein. (1966 aa)
Y1Q_0012818Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (341 aa)
STUB1E3 ubiquitin-protein ligase CHIP isoform A. (339 aa)
TRIM7.2Zinc finger protein RFP isoform B. (472 aa)
PSMD1426S proteasome non-ATPase regulatory subunit 14. (460 aa)
PSMA3Proteasome subunit alpha type. (256 aa)
AKT3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
FRKTyrosine-protein kinase. (544 aa)
MTA2Uncharacterized protein. (676 aa)
PSMB4Proteasome subunit beta; Belongs to the peptidase T1B family. (281 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
USP5Ubiquitin carboxyl-terminal hydrolase. (875 aa)
HYKKProteasome endopeptidase complex. (600 aa)
PMLProtein PML isoform B. (586 aa)
PSMC326S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (404 aa)
RNF141RING finger protein 141. (233 aa)
PSMA1Proteasome subunit alpha type. (261 aa)
LAMTOR4Ragulator complex protein LAMTOR4. (99 aa)
ATN1Atrophin-1 isoform B. (644 aa)
CHD3Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
PSMD5-126S proteasome non-ATPase regulatory subunit 5 isoform B. (837 aa)
PSMB7Proteasome subunit beta. (274 aa)
PSME4Proteasome activator complex subunit 4. (1808 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
RING1E3 ubiquitin-protein ligase RING1. (327 aa)
LAMTOR5Ragulator complex protein LAMTOR5. (91 aa)
Y1Q_0002517E3 ubiquitin-protein ligase TRIM39-like. (521 aa)
PSMA5Proteasome subunit alpha type. (241 aa)
PSMC5Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (411 aa)
MECOMMDS1 and EVI1 complex locus protein EVI1 isoform A. (1159 aa)
PHC3Polyhomeotic-like protein 3. (581 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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