STRINGSTRING
ANAPC7 ANAPC7 PSMD5-1 PSMD5-1 CDC26 CDC26 ANAPC2 ANAPC2 POLE3 POLE3 Y1Q_0003135 Y1Q_0003135 PSMA1 PSMA1 PSMC3 PSMC3 HYKK HYKK RFC4 RFC4 PSMD4 PSMD4 PSMB4 PSMB4 CDC7-1 CDC7-1 ORC1 ORC1 MCM9L MCM9L MCM9 MCM9 KPNA5 KPNA5 PSMB1 PSMB1 PSMA3 PSMA3 KPNA1 KPNA1 ANAPC1 ANAPC1 GINS1 GINS1 MCM6 MCM6 ORC4 ORC4 PSMD14 PSMD14 HIST1H2BF HIST1H2BF HIST2H2BE HIST2H2BE Y1Q_0020100 Y1Q_0020100 Y1Q_0020098 Y1Q_0020098 Y1Q_0022362 Y1Q_0022362 44G24.1 44G24.1 POLD1-2 POLD1-2 RPA1 RPA1 PSMB7 PSMB7 Y1Q_0019041 Y1Q_0019041 UBE2S UBE2S PSME4 PSME4 RPS27A RPS27A MCM8 MCM8 RCBTB1 RCBTB1 RCBTB1-2 RCBTB1-2 CDC23 CDC23 CDK2 CDK2 TM4SF19 TM4SF19 MCM2 MCM2 PSMD6 PSMD6 PSMB8 PSMB8 PSMB9 PSMB9 KPNA6 KPNA6 Y1Q_0003907 Y1Q_0003907 MCM4 MCM4 TM7SF3 TM7SF3 RFC3 RFC3 CCNA1-1 CCNA1-1 RPA3 RPA3 ORC6 ORC6 GINS3 GINS3 POLA2 POLA2 ORC3 ORC3 POLD4 POLD4 CDT1 CDT1 GINS4 GINS4 SKP2 SKP2 CCNE2-1 CCNE2-1 ANAPC10 ANAPC10 PSMD1 PSMD1 Y1Q_0005128 Y1Q_0005128 POLA1 POLA1 MEIOB MEIOB PSMD12 PSMD12 ATAD5 ATAD5 CDK3 CDK3 RFC5 RFC5 RFC2 RFC2 Y1Q_0019034 Y1Q_0019034 CCNE1 CCNE1 Y1Q_0009388 Y1Q_0009388 Y1Q_0008616 Y1Q_0008616 PSMA5 PSMA5 PSMC5 PSMC5 Y1Q_0008724 Y1Q_0008724 ORC2 ORC2 MCM3 MCM3 GMNN GMNN FZR1 FZR1 PSMC4 PSMC4 RBX1 RBX1 MCM5 MCM5 Y1Q_0016099 Y1Q_0016099 Y1Q_0000842 Y1Q_0000842 Y1Q_0000841 Y1Q_0000841 POLE POLE PSMA6 PSMA6 PSME2 PSME2 PSME1 PSME1 H2AFZ H2AFZ PSMD10 PSMD10 GINS2 GINS2 HIST1H2B5L HIST1H2B5L PSMD7 PSMD7 H2AFV H2AFV ORC5 ORC5 MCM10 MCM10 PSMC2 PSMC2 PSMB11 PSMB11 PSMB5 PSMB5 ANAPC11 ANAPC11 PSMD9-1 PSMD9-1 ANAPC5 ANAPC5 SCARB1 SCARB1 CDC45 CDC45 HIST1H4D HIST1H4D Y1Q_0006757 Y1Q_0006757 PSMB6 PSMB6 KXD1 KXD1 CDC16 CDC16 POLD2 POLD2 PSMD13 PSMD13 FEN1 FEN1 PSMA7 PSMA7 ANAPC16 ANAPC16 DNA2 DNA2 Y1Q_0006787 Y1Q_0006787 PSMF1 PSMF1 CUL1 CUL1 Y1Q_0007595 Y1Q_0007595 GLTSCR1-1 GLTSCR1-1 PSMD3 PSMD3 PSMB3 PSMB3 PCNA PCNA Y1Q_0014681 Y1Q_0014681 PSMD2 PSMD2 PSMC1 PSMC1 RFC1 RFC1 ANAPC4 ANAPC4 PRIM1 PRIM1 CDC27 CDC27 PSMD11 PSMD11 CDC6 CDC6 Y1Q_0018383 Y1Q_0018383 Y1Q_0014479 Y1Q_0014479 PRIM2 PRIM2 POLE2 POLE2 PSMC6 PSMC6 Y1Q_0012805 Y1Q_0012805 CCNA2 CCNA2 UBE2C UBE2C PSMB2 PSMB2 MCM7 MCM7 LIG1 LIG1 POLD3-1 POLD3-1 POLD1 POLD1 PSMD8 PSMD8 ANAPC15 ANAPC15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANAPC7Anaphase-promoting complex subunit 7. (608 aa)
PSMD5-126S proteasome non-ATPase regulatory subunit 5 isoform B. (837 aa)
CDC26Anaphase-promoting complex subunit CDC26. (84 aa)
ANAPC2Anaphase-promoting complex subunit 2; Belongs to the cullin family. (675 aa)
POLE3DNA polymerase epsilon subunit 3. (143 aa)
Y1Q_0003135Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (127 aa)
PSMA1Proteasome subunit alpha type. (261 aa)
PSMC326S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (404 aa)
HYKKProteasome endopeptidase complex. (600 aa)
RFC4Replication factor C subunit 4. (364 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
PSMB4Proteasome subunit beta; Belongs to the peptidase T1B family. (281 aa)
CDC7-1Cell division cycle 7-related protein kinase isoform B. (672 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (949 aa)
MCM9LDNA helicase MCM9. (752 aa)
MCM9DNA helicase MCM9; Belongs to the MCM family. (463 aa)
KPNA5Importin subunit alpha; Belongs to the importin alpha family. (539 aa)
PSMB1Proteasome subunit beta. (240 aa)
PSMA3Proteasome subunit alpha type. (256 aa)
KPNA1Importin subunit alpha; Belongs to the importin alpha family. (515 aa)
ANAPC1Anaphase-promoting complex subunit 1. (1942 aa)
GINS1DNA replication complex GINS protein PSF1. (195 aa)
MCM6DNA helicase; Belongs to the MCM family. (822 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (436 aa)
PSMD1426S proteasome non-ATPase regulatory subunit 14. (460 aa)
HIST1H2BFHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
Y1Q_0020100Histone H2B; Belongs to the histone H2B family. (126 aa)
Y1Q_0020098Histone H2B; Belongs to the histone H2B family. (166 aa)
Y1Q_0022362Histone H2B.3-like. (135 aa)
44G24.1Histone H2B.3; Belongs to the histone H2B family. (142 aa)
POLD1-2DNA polymerase delta catalytic subunit. (392 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (584 aa)
PSMB7Proteasome subunit beta. (274 aa)
Y1Q_0019041XPGI domain-containing protein. (343 aa)
UBE2SUbiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (215 aa)
PSME4Proteasome activator complex subunit 4. (1808 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
MCM8DNA helicase MCM8; Belongs to the MCM family. (795 aa)
RCBTB1RCC1 and BTB domain-containing protein 1. (566 aa)
RCBTB1-2BTB domain-containing protein. (595 aa)
CDC23Cell division cycle 23-like protein isoform B. (585 aa)
CDK2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
TM4SF19Transmembrane 4 L6 family member 19. (205 aa)
MCM2DNA helicase; Belongs to the MCM family. (888 aa)
PSMD626S proteasome non-ATPase regulatory subunit 6. (348 aa)
PSMB8Proteasome subunit beta. (282 aa)
PSMB9Proteasome subunit beta. (216 aa)
KPNA6Importin subunit alpha; Belongs to the importin alpha family. (551 aa)
Y1Q_0003907MCM domain-containing protein. (120 aa)
MCM4DNA helicase; Belongs to the MCM family. (861 aa)
TM7SF3Transmembrane 7 superfamily member 3. (581 aa)
RFC3Replication factor C subunit 3. (356 aa)
CCNA1-1Cyclin-A1 isoform C; Belongs to the cyclin family. (445 aa)
RPA3Replication protein A subunit. (120 aa)
ORC6Origin recognition complex subunit 6. (267 aa)
GINS3DNA replication complex GINS protein PSF3. (214 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (597 aa)
ORC3Origin recognition complex subunit 3 isoform A. (713 aa)
POLD4DNA polymerase delta subunit 4 isoform A. (206 aa)
CDT1DNA replication factor Cdt1. (516 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (226 aa)
SKP2S-phase kinase-associated protein 2. (419 aa)
CCNE2-1G1/S-specific cyclin-E2 isoform B; Belongs to the cyclin family. (410 aa)
ANAPC10Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (179 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
Y1Q_0005128Proteasome subunit beta. (277 aa)
POLA1DNA polymerase. (1498 aa)
MEIOBMeiosis-specific with OB domain-containing protein isoform A. (516 aa)
PSMD1226S proteasome non-ATPase regulatory subunit 12. (441 aa)
ATAD5ATPase family AAA domain-containing protein 5. (1673 aa)
CDK3Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (348 aa)
RFC5Replication factor C subunit 5. (336 aa)
RFC2Replication factor C subunit 2. (340 aa)
Y1Q_0019034RPN1_C domain-containing protein. (356 aa)
CCNE1G1/S-specific cyclin-E1; Belongs to the cyclin family. (408 aa)
Y1Q_0009388Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
Y1Q_0008616HSA domain-containing protein. (1301 aa)
PSMA5Proteasome subunit alpha type. (241 aa)
PSMC5Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (411 aa)
Y1Q_0008724Uncharacterized protein. (128 aa)
ORC2Origin recognition complex subunit 2. (569 aa)
MCM3DNA helicase; Belongs to the MCM family. (772 aa)
GMNNGeminin. (223 aa)
FZR1Fizzy-related protein-like protein. (493 aa)
PSMC426S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
RBX1E3 ubiquitin-protein ligase RBX1. (104 aa)
MCM5DNA helicase; Belongs to the MCM family. (773 aa)
Y1Q_0016099Histone H2B; Belongs to the histone H2B family. (126 aa)
Y1Q_0000842DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (917 aa)
Y1Q_0000841DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (311 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (1114 aa)
PSMA6Proteasome subunit alpha type. (252 aa)
PSME2Proteasome activator complex subunit 2. (242 aa)
PSME1Proteasome activator complex subunit 1. (150 aa)
H2AFZHistone H2A; Belongs to the histone H2A family. (128 aa)
PSMD1026S proteasome non-ATPase regulatory subunit 10. (226 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
HIST1H2B5LHistone H2B; Belongs to the histone H2B family. (126 aa)
PSMD726S proteasome non-ATPase regulatory subunit 7. (322 aa)
H2AFVHistone H2A; Belongs to the histone H2A family. (128 aa)
ORC5Origin recognition complex subunit 5. (420 aa)
MCM10MCM10-like protein. (868 aa)
PSMC226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
PSMB11Proteasome subunit beta. (261 aa)
PSMB5Proteasome subunit beta type-5. (211 aa)
ANAPC11Anaphase-promoting complex subunit 11. (98 aa)
PSMD9-126S proteasome non-ATPase regulatory subunit 9 isoform B. (205 aa)
ANAPC5Anaphase-promoting complex subunit 5. (756 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
CDC45Cell division control 45-like protein. (501 aa)
HIST1H4DHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Y1Q_0006757Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (111 aa)
PSMB6Proteasome subunit beta. (227 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
CDC16Cell division cycle 16-like protein. (622 aa)
POLD2DNA polymerase delta subunit 2. (501 aa)
PSMD1326S proteasome non-ATPase regulatory subunit 13. (376 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
PSMA7Proteasome subunit alpha type. (248 aa)
ANAPC16Anaphase-promoting complex subunit 16. (110 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1052 aa)
Y1Q_0006787DNA polymerase delta catalytic subunit-like. (198 aa)
PSMF1Proteasome inhibitor PI31 subunit. (273 aa)
CUL1Cullin-1; Belongs to the cullin family. (776 aa)
Y1Q_0007595DNA_pol_B_exo1 domain-containing protein. (86 aa)
GLTSCR1-1Glioma tumor suppressor candidate region 1 protein isoform C. (1814 aa)
PSMD326S proteasome non-ATPase regulatory subunit 3. (521 aa)
PSMB3Proteasome subunit beta. (205 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
Y1Q_0014681Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (119 aa)
PSMD226S proteasome non-ATPase regulatory subunit 2. (513 aa)
PSMC126S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
RFC1Replication factor C subunit 1. (1130 aa)
ANAPC4Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (796 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (456 aa)
CDC27Cell division cycle 27-like protein. (834 aa)
PSMD1126S proteasome non-ATPase regulatory subunit 11. (518 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (549 aa)
Y1Q_0018383Histone H2B-like; Belongs to the histone H2B family. (152 aa)
Y1Q_0014479Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (124 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (503 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (525 aa)
PSMC626S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
Y1Q_0012805Histone H2B; Belongs to the histone H2B family. (118 aa)
CCNA2Cyclin-A2; Belongs to the cyclin family. (382 aa)
UBE2CUbiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
PSMB2Proteasome subunit beta. (201 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
LIG1DNA ligase. (954 aa)
POLD3-1DNA polymerase delta subunit 3 isoform A. (466 aa)
POLD1DNA polymerase. (439 aa)
PSMD826S proteasome non-ATPase regulatory subunit 8. (257 aa)
ANAPC15Anaphase-promoting complex subunit 15. (94 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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