STRINGSTRING
RPL27A RPL27A EIF4B EIF4B EIF2B4 EIF2B4 RPL37A RPL37A RPS19 RPS19 RPS3 RPS3 AKNAD1-1 AKNAD1-1 RPL5 RPL5 EIF4A3 EIF4A3 RPL26L1 RPL26L1 RPL4 RPL4 RPS27L RPS27L EIF2S1 EIF2S1 EIF3M EIF3M Y1Q_0000679 Y1Q_0000679 RPS13 RPS13 RPL24 RPL24 RPL12 RPL12 RPL7A RPL7A RPL18 RPL18 RPL28 RPL28 RPL22L1 RPL22L1 Y1Q_0004251 Y1Q_0004251 RPL34 RPL34 RPS17 RPS17 EIF2B2 EIF2B2 RPS5 RPS5 RPL11-1 RPL11-1 RPS27 RPS27 RPS23 RPS23 SEPP1L SEPP1L RPS15 RPS15 RPS16 RPS16 EIF3G EIF3G RPL18A RPL18A RPL7L1 RPL7L1 EIF2B5 EIF2B5 RPS8 RPS8 RPL27 RPL27 RPS3A RPS3A RPL9 RPL9 EIF5 EIF5 RPLP1 RPLP1 RPS4X RPS4X RPS11 RPS11 EIF3K EIF3K Y1Q_0006611 Y1Q_0006611 RPS9 RPS9 RPL23 RPL23 RPL19 RPL19 RPSA RPSA RPS6 RPS6 EIF4EBP2 EIF4EBP2 EIF2S2 EIF2S2 PABPC1L PABPC1L RPS21 RPS21 RPS10 RPS10 EIF4E1B EIF4E1B EIF3C EIF3C RPLP2 RPLP2 Y1Q_0006266 Y1Q_0006266 EIF5B EIF5B RPL31 RPL31 RPL38 RPL38 EIF3A EIF3A RPL6 RPL6 RPS26 RPS26 EIF2B1 EIF2B1 RPL8 RPL8 EIF4EBP3 EIF4EBP3 RPL36A RPL36A EIF4E EIF4E RPL13A RPL13A EIF3D EIF3D EIF3L EIF3L RPL3-2 RPL3-2 RPL29 RPL29 RPL10L RPL10L RPL36 RPL36 EIF4EBP1 EIF4EBP1 RSRC1 RSRC1 RNPEPL1 RNPEPL1 Y1Q_0014921 Y1Q_0014921 RPS7 RPS7 RPS18 RPS18 EIF4H EIF4H RPLP0 RPLP0 RPL22 RPL22 Y1Q_0009070 Y1Q_0009070 RSAD1 RSAD1 RPS2 RPS2 RPL3 RPL3 EIF3B EIF3B Y1Q_0008192 Y1Q_0008192 ARL6IP1 ARL6IP1 EIF2S3 EIF2S3 RPL35 RPL35 RPL30 RPL30 EIF3E EIF3E EIF3H EIF3H RPL37 RPL37 RPL17 RPL17 RPS25 RPS25 RPL23A RPL23A EIF3J EIF3J RPS24-1 RPS24-1 EIF3F EIF3F RPL21 RPL21 RPL14 RPL14 RPL15 RPL15 RPS20 RPS20 RPL7 RPL7 EIF3I EIF3I PABPC1 PABPC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL27A60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
EIF4BEukaryotic translation initiation factor 4B. (630 aa)
EIF2B4Translation initiation factor eIF-2B subunit delta; Belongs to the eIF-2B alpha/beta/delta subunits family. (352 aa)
RPL37A60S ribosomal protein L37a. (92 aa)
RPS1940S ribosomal protein S19. (515 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (278 aa)
AKNAD1-1Protein AKNAD1 isoform A. (1047 aa)
RPL560S ribosomal protein L5. (317 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (407 aa)
RPL26L160S ribosomal protein L26-like 1. (116 aa)
RPL460S ribosomal protein L4. (363 aa)
RPS27L40S ribosomal protein S27. (84 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (352 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (374 aa)
Y1Q_0000679Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (111 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (147 aa)
RPL2460S ribosomal protein L24. (157 aa)
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (147 aa)
RPL7A60S ribosomal protein L7a. (266 aa)
RPL1860S ribosomal protein L18. (188 aa)
RPL2860S ribosomal protein L28. (153 aa)
RPL22L160S ribosomal protein L22-like 1. (121 aa)
Y1Q_0004251RL10P_insert domain-containing protein. (178 aa)
RPL3460S ribosomal protein L34. (117 aa)
RPS1740S ribosomal protein S17. (1124 aa)
EIF2B2Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family. (351 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (514 aa)
RPL11-160S ribosomal protein L11 isoform A; Belongs to the universal ribosomal protein uL5 family. (179 aa)
RPS2740S ribosomal protein S27. (84 aa)
RPS2340S ribosomal protein S23 isoform A; Belongs to the universal ribosomal protein uS12 family. (143 aa)
SEPP1LSelenoprotein Pb. (245 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (161 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (167 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (333 aa)
RPL18A60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
RPL7L160S ribosomal protein L7-like 1. (247 aa)
EIF2B5Translation initiation factor eIF-2B subunit epsilon. (714 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
RPL2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (170 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
RPL960S ribosomal protein L9. (143 aa)
EIF5Eukaryotic translation initiation factor 5. (458 aa)
RPLP160S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (280 aa)
RPS1140S ribosomal protein S11 isoform A; Belongs to the universal ribosomal protein uS17 family. (158 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (201 aa)
Y1Q_0006611Uncharacterized protein; Belongs to the DEAD box helicase family. (384 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
RPL2360S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family. (140 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
RPSA40S ribosomal protein SA. (149 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
EIF4EBP2Eukaryotic translation initiation factor 4E-binding protein 2. (115 aa)
EIF2S2Eukaryotic translation initiation factor 2 subunit 2. (334 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (580 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
RPS1040S ribosomal protein S10. (195 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B; Belongs to the eukaryotic initiation factor 4E family. (218 aa)
EIF3CEukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (909 aa)
RPLP260S acidic ribosomal protein P2 isoform A; Belongs to the eukaryotic ribosomal protein P1/P2 family. (141 aa)
Y1Q_0006266Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (184 aa)
EIF5BEukaryotic translation initiation factor 5B isoform B. (1213 aa)
RPL3160S ribosomal protein L31. (180 aa)
RPL3860S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1281 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
EIF2B1Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family. (302 aa)
RPL860S ribosomal protein L8. (267 aa)
EIF4EBP3Eukaryotic translation initiation factor 4E-binding protein 3. (112 aa)
RPL36A60S ribosomal protein L36a isoform B; Belongs to the eukaryotic ribosomal protein eL42 family. (150 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
RPL13A60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (203 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (593 aa)
EIF3LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (564 aa)
RPL3-2Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (403 aa)
RPL2960S ribosomal protein L29. (260 aa)
RPL10L60S ribosomal protein L10. (77 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (186 aa)
EIF4EBP1Eukaryotic translation initiation factor 4E-binding protein 1. (112 aa)
RSRC1Serine/Arginine-related protein 53. (247 aa)
RNPEPL1Arginyl aminopeptidase-like 1. (559 aa)
Y1Q_0014921Patatin-like phospholipase domain-containing protein 1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (391 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
EIF4HEukaryotic translation initiation factor 4H. (256 aa)
RPLP060S acidic ribosomal protein P0. (367 aa)
RPL2260S ribosomal protein L22. (125 aa)
Y1Q_0009070Olfactory receptor. (317 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (481 aa)
RPS240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (221 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (407 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (688 aa)
Y1Q_0008192Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (126 aa)
ARL6IP1ADP-ribosylation factor-like protein 6-interacting protein 1; Belongs to the universal ribosomal protein uS8 family. (380 aa)
EIF2S3Eukaryotic translation initiation factor 2 subunit 3. (472 aa)
RPL3560S ribosomal protein L35. (123 aa)
RPL3060S ribosomal protein L30. (175 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (344 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
RPL1760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (264 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (126 aa)
RPL23A60S ribosomal protein L23a. (144 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (254 aa)
RPS24-140S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (340 aa)
RPL2160S ribosomal protein L21. (147 aa)
RPL1460S ribosomal protein L14. (139 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (186 aa)
RPS2040S ribosomal protein S20. (119 aa)
RPL760S ribosomal protein L7. (223 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (325 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (617 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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