STRINGSTRING
NPM2 NPM2 CENPQ-1 CENPQ-1 CENPM CENPM Y1Q_0020098 Y1Q_0020098 HIST2H2BE HIST2H2BE HIST1H2BF HIST1H2BF CENPW CENPW SMARCA5-2 SMARCA5-2 HJURP HJURP MIS18A MIS18A CENPL CENPL Y1Q_0002109 Y1Q_0002109 CENPC CENPC RUVBL1 RUVBL1 RBBP4-2 RBBP4-2 Y1Q_0016099 Y1Q_0016099 ITGB3BP ITGB3BP CENPN CENPN H2AFZ H2AFZ CENPI CENPI CASC5 CASC5 SMARCA5 SMARCA5 HIST1H2B5L HIST1H2B5L H2AFV H2AFV NPM1 NPM1 HIST1H4D HIST1H4D CENPO CENPO CENPP CENPP Y1Q_0018383 Y1Q_0018383 MIS18BP1 MIS18BP1 Y1Q_0012805 Y1Q_0012805 CENPH CENPH OIP5 OIP5 CENPK CENPK RBBP4 RBBP4 RSF1 RSF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NPM2Nucleoplasmin-2. (210 aa)
CENPQ-1Centromere protein Q isoform A. (220 aa)
CENPMCentromere protein M. (177 aa)
Y1Q_0020098Histone H2B; Belongs to the histone H2B family. (166 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST1H2BFHistone H2B; Belongs to the histone H2B family. (126 aa)
CENPWCentromere protein W. (76 aa)
SMARCA5-2Uncharacterized protein. (1027 aa)
HJURPHolliday junction recognition protein. (378 aa)
MIS18AProtein yippee-like; Belongs to the yippee family. (156 aa)
CENPLCentromere protein L isoform A. (341 aa)
Y1Q_0002109Uncharacterized protein. (179 aa)
CENPCCentromere protein C. (613 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
RBBP4-2WD_REPEATS_REGION domain-containing protein. (425 aa)
Y1Q_0016099Histone H2B; Belongs to the histone H2B family. (126 aa)
ITGB3BPCentromere protein R. (181 aa)
CENPNCentromere protein N. (347 aa)
H2AFZHistone H2A; Belongs to the histone H2A family. (128 aa)
CENPICentromere protein I. (736 aa)
CASC5Protein CASC5 isoform A. (2158 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1053 aa)
HIST1H2B5LHistone H2B; Belongs to the histone H2B family. (126 aa)
H2AFVHistone H2A; Belongs to the histone H2A family. (128 aa)
NPM1Nucleophosmin. (255 aa)
HIST1H4DHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CENPOCentromere protein O. (351 aa)
CENPPCentromere protein P. (150 aa)
Y1Q_0018383Histone H2B-like; Belongs to the histone H2B family. (152 aa)
MIS18BP1Mis18-binding protein 1. (1070 aa)
Y1Q_0012805Histone H2B; Belongs to the histone H2B family. (118 aa)
CENPHCentromere protein H. (240 aa)
OIP5Protein Mis18-beta. (192 aa)
CENPKCentromere protein K. (290 aa)
RBBP4Histone-binding protein RBBP4. (424 aa)
RSF1Remodeling and spacing factor 1. (1444 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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