STRINGSTRING
44G24.1 44G24.1 Y1Q_0012805 Y1Q_0012805 WAC WAC Y1Q_0018383 Y1Q_0018383 YIPF7 YIPF7 UBE2K UBE2K TMEM129 TMEM129 CINP CINP CNFN CNFN PCNA PCNA UBE2Z UBE2Z OTULIN OTULIN FAM105A FAM105A CDC34 CDC34 UBE2D1 UBE2D1 KXD1 KXD1 RNF181 RNF181 Y1Q_0015762 Y1Q_0015762 PEX12 PEX12 SCARB1 SCARB1 UBE2D2 UBE2D2 USP9X USP9X UBE2H UBE2H UBE2A UBE2A CDC73 CDC73 SHPRH SHPRH BCL10 BCL10 Y1Q_0016099 Y1Q_0016099 UBE2G2 UBE2G2 RNF20 RNF20 HLTF HLTF UBE2T UBE2T RNF144A RNF144A UBE2G1 UBE2G1 PEX10 PEX10 PEX14 PEX14 USP7 USP7 PAF1 PAF1 RNF40 RNF40 RTF1 RTF1 AKTIP-1 AKTIP-1 UBE2V2 UBE2V2 UBE2W UBE2W RAD18 RAD18 YIPF4 YIPF4 PEX13 PEX13 RPS27A RPS27A UBE2S UBE2S PEX5 PEX5 USP5-2 USP5-2 CTR9 CTR9 SLC39A13 SLC39A13 WDR61 WDR61 LEO1 LEO1 VIMP VIMP UBE2B UBE2B YIPF5 YIPF5 PEX5L PEX5L UBE2L3 UBE2L3 UBE2R2 UBE2R2 HIST1H2BF HIST1H2BF HIST2H2BE HIST2H2BE Y1Q_0020100 Y1Q_0020100 Y1Q_0020098 Y1Q_0020098 UBE2N UBE2N Y1Q_0022362 Y1Q_0022362 UBE2C UBE2C
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
44G24.1Histone H2B.3; Belongs to the histone H2B family. (142 aa)
Y1Q_0012805Histone H2B; Belongs to the histone H2B family. (118 aa)
WACWW domain-containing adapter protein with coiled-coil isoform B. (617 aa)
Y1Q_0018383Histone H2B-like; Belongs to the histone H2B family. (152 aa)
YIPF7Protein YIPF. (333 aa)
UBE2KUbiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
TMEM129E3 ubiquitin-protein ligase TM129. (362 aa)
CINPCyclin-dependent kinase 2-interacting protein. (211 aa)
CNFNCornifelin. (119 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
UBE2ZUbiquitin-conjugating enzyme E2 Z. (272 aa)
OTULINUbiquitin thioesterase otulin isoform B. (480 aa)
FAM105AInactive ubiquitin thioesterase FAM105A. (371 aa)
CDC34Ubiquitin-conjugating enzyme E2 R1; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)
UBE2D1Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
RNF181E3 ubiquitin-protein ligase RNF181. (200 aa)
Y1Q_0015762Uncharacterized protein. (824 aa)
PEX12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (355 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
UBE2D2Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
USP9XPutative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family. (2552 aa)
UBE2HUbiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
UBE2AUbiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
CDC73Parafibromin. (531 aa)
SHPRHE3 ubiquitin-protein ligase SHPRH. (1616 aa)
BCL10B-cell lymphoma/leukemia 10. (256 aa)
Y1Q_0016099Histone H2B; Belongs to the histone H2B family. (126 aa)
UBE2G2Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
RNF20E3 ubiquitin protein ligase. (1032 aa)
HLTFHelicase-like transcription factor. (990 aa)
UBE2TUbiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (198 aa)
RNF144ARBR-type E3 ubiquitin transferase. (305 aa)
UBE2G1Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (119 aa)
PEX10Peroxisome biogenesis factor 10. (326 aa)
PEX14Peroxisomal membrane protein PEX14. (378 aa)
USP7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1080 aa)
PAF1RNA polymerase II-associated factor 1-like protein. (503 aa)
RNF40E3 ubiquitin protein ligase. (996 aa)
RTF1RNA polymerase-associated RTF1-like protein. (233 aa)
AKTIP-1AKT-interacting protein isoform B. (287 aa)
UBE2V2Ubiquitin-conjugating enzyme E2 variant 2. (144 aa)
UBE2WUbiquitin-conjugating enzyme E2 W. (151 aa)
RAD18E3 ubiquitin-protein ligase RAD18. (512 aa)
YIPF4Protein YIPF. (248 aa)
PEX13Peroxisome biogenesis factor 13. (398 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
UBE2SUbiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (215 aa)
PEX5Peroxisomal biogenesis factor 5 isoform A. (646 aa)
USP5-2Ubiquitin carboxyl-terminal hydrolase. (831 aa)
CTR9RNA polymerase-associated CTR9-like protein. (1135 aa)
SLC39A13Zinc transporter ZIP13. (351 aa)
WDR61WD repeat-containing protein 61. (339 aa)
LEO1RNA polymerase-associated protein LEO1. (653 aa)
VIMPSelenoprotein S. (189 aa)
UBE2BUbiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
YIPF5Protein YIPF. (302 aa)
PEX5LPEX5-related protein isoform C. (608 aa)
UBE2L3Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
UBE2R2Ubiquitin-conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family. (207 aa)
HIST1H2BFHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
Y1Q_0020100Histone H2B; Belongs to the histone H2B family. (126 aa)
Y1Q_0020098Histone H2B; Belongs to the histone H2B family. (166 aa)
UBE2NUbiquitin-conjugating enzyme E2 N. (112 aa)
Y1Q_0022362Histone H2B.3-like. (135 aa)
UBE2CUbiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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