STRINGSTRING
Y1Q_0012805 Y1Q_0012805 44G24.1 44G24.1 Y1Q_0022362 Y1Q_0022362 UBE2N UBE2N Y1Q_0020098 Y1Q_0020098 Y1Q_0020100 Y1Q_0020100 HIST2H2BE HIST2H2BE HIST1H2BF HIST1H2BF UBE2L3 UBE2L3 PEX5L PEX5L YIPF5 YIPF5 UBE2B UBE2B VIMP VIMP LEO1 LEO1 WDR61 WDR61 SLC39A13 SLC39A13 CTR9 CTR9 PEX5 PEX5 RPS27A RPS27A PEX13 PEX13 YIPF4 YIPF4 RAD18 RAD18 UBE2V2 UBE2V2 RTF1 RTF1 RNF40 RNF40 PAF1 PAF1 PEX14 PEX14 PEX10 PEX10 RNF144A RNF144A HLTF HLTF RNF20 RNF20 Y1Q_0016099 Y1Q_0016099 BCL10 BCL10 SHPRH SHPRH CDC73 CDC73 UBE2A UBE2A UBE2D2 UBE2D2 SCARB1 SCARB1 PEX12 PEX12 Y1Q_0015762 Y1Q_0015762 RNF181 RNF181 KXD1 KXD1 UBE2D1 UBE2D1 PCNA PCNA CINP CINP TMEM129 TMEM129 YIPF7 YIPF7 Y1Q_0018383 Y1Q_0018383 WAC WAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0012805Histone H2B; Belongs to the histone H2B family. (118 aa)
44G24.1Histone H2B.3; Belongs to the histone H2B family. (142 aa)
Y1Q_0022362Histone H2B.3-like. (135 aa)
UBE2NUbiquitin-conjugating enzyme E2 N. (112 aa)
Y1Q_0020098Histone H2B; Belongs to the histone H2B family. (166 aa)
Y1Q_0020100Histone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST1H2BFHistone H2B; Belongs to the histone H2B family. (126 aa)
UBE2L3Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
PEX5LPEX5-related protein isoform C. (608 aa)
YIPF5Protein YIPF. (302 aa)
UBE2BUbiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
VIMPSelenoprotein S. (189 aa)
LEO1RNA polymerase-associated protein LEO1. (653 aa)
WDR61WD repeat-containing protein 61. (339 aa)
SLC39A13Zinc transporter ZIP13. (351 aa)
CTR9RNA polymerase-associated CTR9-like protein. (1135 aa)
PEX5Peroxisomal biogenesis factor 5 isoform A. (646 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
PEX13Peroxisome biogenesis factor 13. (398 aa)
YIPF4Protein YIPF. (248 aa)
RAD18E3 ubiquitin-protein ligase RAD18. (512 aa)
UBE2V2Ubiquitin-conjugating enzyme E2 variant 2. (144 aa)
RTF1RNA polymerase-associated RTF1-like protein. (233 aa)
RNF40E3 ubiquitin protein ligase. (996 aa)
PAF1RNA polymerase II-associated factor 1-like protein. (503 aa)
PEX14Peroxisomal membrane protein PEX14. (378 aa)
PEX10Peroxisome biogenesis factor 10. (326 aa)
RNF144ARBR-type E3 ubiquitin transferase. (305 aa)
HLTFHelicase-like transcription factor. (990 aa)
RNF20E3 ubiquitin protein ligase. (1032 aa)
Y1Q_0016099Histone H2B; Belongs to the histone H2B family. (126 aa)
BCL10B-cell lymphoma/leukemia 10. (256 aa)
SHPRHE3 ubiquitin-protein ligase SHPRH. (1616 aa)
CDC73Parafibromin. (531 aa)
UBE2AUbiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
UBE2D2Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
PEX12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (355 aa)
Y1Q_0015762Uncharacterized protein. (824 aa)
RNF181E3 ubiquitin-protein ligase RNF181. (200 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
UBE2D1Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
CINPCyclin-dependent kinase 2-interacting protein. (211 aa)
TMEM129E3 ubiquitin-protein ligase TM129. (362 aa)
YIPF7Protein YIPF. (333 aa)
Y1Q_0018383Histone H2B-like; Belongs to the histone H2B family. (152 aa)
WACWW domain-containing adapter protein with coiled-coil isoform B. (617 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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