STRINGSTRING
Y1Q_0020098 Y1Q_0020098 Y1Q_0020100 Y1Q_0020100 HIST2H2BE HIST2H2BE HIST1H2BF HIST1H2BF SETD1A SETD1A Y1Q_0001537 Y1Q_0001537 RBBP5 RBBP5 WDR5 WDR5 CBFB CBFB SETD5 SETD5 GATA1 GATA1 TMEM62 TMEM62 Y1Q_0009388 Y1Q_0009388 ASH2L ASH2L ZFPM1 ZFPM1 CREBBP CREBBP Y1Q_0024039 Y1Q_0024039 Y1Q_0016099 Y1Q_0016099 KMT2D-2 KMT2D-2 H2AFZ H2AFZ HIST1H2B5L HIST1H2B5L H2AFV H2AFV KMT2E KMT2E KMT2B-2 KMT2B-2 SETD1B SETD1B HIST1H4D HIST1H4D Y1Q_0006757 Y1Q_0006757 NWD1 NWD1 Y1Q_0003629 Y1Q_0003629 Y1Q_0016627 Y1Q_0016627 PRMT1 PRMT1 Y1Q_0018383 Y1Q_0018383 KMT2D KMT2D Y1Q_0014479 Y1Q_0014479 Y1Q_0012805 Y1Q_0012805 KMT2B KMT2B KMT2A KMT2A Y1Q_0013169 Y1Q_0013169
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0020098Histone H2B; Belongs to the histone H2B family. (166 aa)
Y1Q_0020100Histone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST1H2BFHistone H2B; Belongs to the histone H2B family. (126 aa)
SETD1AHistone-lysine N-methyltransferase SETD1A. (1063 aa)
Y1Q_0001537HDAC_interact domain-containing protein. (1175 aa)
RBBP5Retinoblastoma-binding protein 5 isoform B. (539 aa)
WDR5WD repeat-containing protein 5. (334 aa)
CBFBCore-binding factor subunit beta. (187 aa)
SETD5SET domain-containing protein 5. (1456 aa)
GATA1Erythroid transcription factor. (485 aa)
TMEM62Transmembrane protein 62. (641 aa)
Y1Q_0009388Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
ASH2LSet1/Ash2 histone methyltransferase complex subunit ASH2. (591 aa)
ZFPM1Zinc finger protein ZFPM1. (1155 aa)
CREBBPCREB-binding protein isoform C. (2208 aa)
Y1Q_0024039KIX domain-containing protein. (131 aa)
Y1Q_0016099Histone H2B; Belongs to the histone H2B family. (126 aa)
KMT2D-2Uncharacterized protein. (2572 aa)
H2AFZHistone H2A; Belongs to the histone H2A family. (128 aa)
HIST1H2B5LHistone H2B; Belongs to the histone H2B family. (126 aa)
H2AFVHistone H2A; Belongs to the histone H2A family. (128 aa)
KMT2EHistone-lysine N-methyltransferase 2E isoform A. (1230 aa)
KMT2B-2Uncharacterized protein. (286 aa)
SETD1BHistone-lysine N-methyltransferase SETD1B isoform B. (1549 aa)
HIST1H4DHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Y1Q_0006757Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (111 aa)
NWD1Tetraspanin. (2546 aa)
Y1Q_0003629Histone-lysine N-methyltransferase 2D-like. (492 aa)
Y1Q_0016627Uncharacterized protein. (1154 aa)
PRMT1Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (379 aa)
Y1Q_0018383Histone H2B-like; Belongs to the histone H2B family. (152 aa)
KMT2DHistone-lysine N-methyltransferase 2D isoform C. (4340 aa)
Y1Q_0014479Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (124 aa)
Y1Q_0012805Histone H2B; Belongs to the histone H2B family. (118 aa)
KMT2BHistone-lysine N-methyltransferase 2B isoform A. (615 aa)
KMT2AHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3387 aa)
Y1Q_0013169FYR N-terminal domain-containing protein. (275 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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