STRINGSTRING
RAB1A RAB1A DENND1A DENND1A MORN5 MORN5 CUNH9orf116 CUNH9orf116 RAB14 RAB14 RABGAP1-2 RABGAP1-2 TSC1 TSC1 TBC1D13 TBC1D13 ST5-2 ST5-2 DENND5A DENND5A SBF2-2 SBF2-2 MADD MADD RAB7B RAB7B RAB8B RAB8B TBC1D2B TBC1D2B RAB27A RAB27A RAB11A RAB11A DENND4B DENND4B Y1Q_0012698 Y1Q_0012698 RIC1 RIC1 VPS9D1 VPS9D1 GRIPAP1 GRIPAP1 ARMC5-1 ARMC5-1 TRAPPC3L TRAPPC3L AKT3 AKT3 RAB3GAP1 RAB3GAP1 ALS2CL ALS2CL SBF1 SBF1 Y1Q_0000157 Y1Q_0000157 Y1Q_0010427 Y1Q_0010427 RAB27B RAB27B ARL15 ARL15 TRAPPC13 TRAPPC13 TBC1D10B TBC1D10B DENND6A-2 DENND6A-2 GAPVD1 GAPVD1 RAB9A RAB9A TBC1D7 TBC1D7 CCZ1 CCZ1 RSPH10B RSPH10B HPS4 HPS4 TSC2 TSC2 ARF6 ARF6 MORN1 MORN1 TRAPPC1 TRAPPC1 RAB35 RAB35 RAB13 RAB13 JPH4 JPH4 SYTL1 SYTL1 MON1A MON1A RAB39A RAB39A DENND3 DENND3 RIN3 RIN3 WDR54 WDR54 TBC1D14 TBC1D14 TRAPPC11 TRAPPC11 RAB18 RAB18 Y1Q_0017424 Y1Q_0017424 TBC1D30 TBC1D30 TBC1D17 TBC1D17 RAB3IP RAB3IP RAB21 RAB21 Y1Q_0006870 Y1Q_0006870 ST5 ST5 DENND4B-2 DENND4B-2 RAB6A-1 RAB6A-1 TBC1D10A TBC1D10A RABEP1 RABEP1 RABGEF1 RABGEF1 TBC1D24-2 TBC1D24-2 ANKRD27 ANKRD27 SH3YL1 SH3YL1 TRAPPC12 TRAPPC12 DENND2D DENND2D ZCCHC3 ZCCHC3 MORN4 MORN4 ALS2 ALS2 RAB17 RAB17 ULK2 ULK2 Y1Q_0021014 Y1Q_0021014 RAB11B RAB11B JPH2 JPH2 DENND1B DENND1B RIN2 RIN2 RAB12 RAB12 RAB31 RAB31 RAB33B RAB33B RAB6B RAB6B GGA1 GGA1 DENND5B DENND5B Y1Q_0024233 Y1Q_0024233 Y1Q_0023092 Y1Q_0023092 TBC1D16 TBC1D16 DENND1C DENND1C TBC1D17-2 TBC1D17-2 RAB32 RAB32 RGP1 RGP1 SYTL2-1 SYTL2-1 ARMC5-2 ARMC5-2 RAB33A RAB33A RAB9B RAB9B RAB39B RAB39B Y1Q_0015540 Y1Q_0015540 RAB41 RAB41 CHM CHM OPTN OPTN GDI2 GDI2 RSPH1 RSPH1 RAB5B RAB5B ULK1A ULK1A MORN3 MORN3 ANKMY1 ANKMY1 TBC1D24 TBC1D24 GRTP1 GRTP1 RAB3IL1-1 RAB3IL1-1 RAB8A-1 RAB8A-1 RAB2BL RAB2BL JPH2-2 JPH2-2 TBC1D12 TBC1D12 DENND4C DENND4C GABARAPL2 GABARAPL2 Y1Q_0017108 Y1Q_0017108 RAB3GAP2 RAB3GAP2 HPS1 HPS1 SBF2 SBF2 DENND6A DENND6A TBC1D10C TBC1D10C LCA5 LCA5 RAB10 RAB10 GAREM2 GAREM2 RAB5A RAB5A AKT2 AKT2 Y1Q_0021873 Y1Q_0021873 TRAPPC8 TRAPPC8 Y1Q_0003905 Y1Q_0003905 GAREM1 GAREM1 JPH1 JPH1 RAB15 RAB15 RABEP2 RABEP2 YWHAE YWHAE TBC1D25 TBC1D25 TBC1D21 TBC1D21 RAB7A RAB7A RABGAP1 RABGAP1 Y1Q_0004587 Y1Q_0004587 AKT3-2 AKT3-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAB1ARas-related protein Rab-1A. (205 aa)
DENND1AUDENN domain-containing protein. (818 aa)
MORN5MORN repeat-containing protein 5. (172 aa)
CUNH9orf116Uncharacterized protein. (137 aa)
RAB14Ras-related protein Rab-14. (215 aa)
RABGAP1-2Uncharacterized protein. (1110 aa)
TSC1Hamartin isoform B. (1115 aa)
TBC1D13TBC1 domain family member 13. (400 aa)
ST5-2UDENN domain-containing protein. (1122 aa)
DENND5AUncharacterized protein. (1287 aa)
SBF2-2Uncharacterized protein. (1894 aa)
MADDMAP kinase-activating death domain protein isoform E. (1625 aa)
RAB7BRas-related protein Rab-7b. (207 aa)
RAB8BRas-related protein Rab-8B. (126 aa)
TBC1D2BTBC1 domain family member 2B isoform B. (964 aa)
RAB27ARas-related protein Rab-27A. (205 aa)
RAB11ARas-related protein Rab-11A. (216 aa)
DENND4BDENN domain-containing protein 4B isoform B. (1983 aa)
Y1Q_0012698RIC1 domain-containing protein. (492 aa)
RIC1RAB6A-GEF complex partner protein 1 isoform C. (747 aa)
VPS9D1VPS9 domain-containing protein 1. (551 aa)
GRIPAP1GRIP1-associated protein 1 isoform A. (831 aa)
ARMC5-1Armadillo repeat-containing protein 5. (628 aa)
TRAPPC3LUncharacterized protein. (90 aa)
AKT3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
RAB3GAP1Rab3 GTPase-activating protein catalytic subunit. (1012 aa)
ALS2CLALS2 C-terminal-like protein isoform B. (1041 aa)
SBF1Myotubularin-related protein 5. (956 aa)
Y1Q_0000157Uncharacterized protein. (694 aa)
Y1Q_0010427Uncharacterized protein. (275 aa)
RAB27BRas-related protein Rab-27B. (247 aa)
ARL15ADP-ribosylation factor-like protein 15. (215 aa)
TRAPPC13Trafficking protein particle complex subunit 13 isoform C. (427 aa)
TBC1D10BTBC1 domain family member 10B. (1071 aa)
DENND6A-2UDENN domain-containing protein. (589 aa)
GAPVD1GTPase-activating protein and VPS9 domain-containing protein 1 isoform B. (1434 aa)
RAB9ARas-related protein Rab-9A. (201 aa)
TBC1D7TBC1 domain family member 7. (270 aa)
CCZ1Vacuolar fusion CCZ1-like protein. (478 aa)
RSPH10BRadial spoke head 10-like protein B. (935 aa)
HPS4Hermansky-Pudlak syndrome 4 protein. (698 aa)
TSC2Tuberin isoform D. (1829 aa)
ARF6ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
MORN1MORN repeat-containing protein 1. (487 aa)
TRAPPC1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
RAB35Ras-related protein Rab-35. (201 aa)
RAB13Ras-related protein Rab-13. (256 aa)
JPH4Junctophilin-4. (526 aa)
SYTL1Synaptotagmin-like protein 1. (226 aa)
MON1AVacuolar fusion MON1-like protein A. (464 aa)
RAB39ARas-related protein Rab-39A. (216 aa)
DENND3DENN domain-containing protein 3. (1270 aa)
RIN3Ras and Rab interactor 3. (963 aa)
WDR54WD repeat-containing protein 54. (174 aa)
TBC1D14TBC1 domain family member 14 isoform B. (716 aa)
TRAPPC11Trafficking protein particle complex subunit 11. (1117 aa)
RAB18Ras-related protein Rab-18. (206 aa)
Y1Q_0017424Uncharacterized protein. (235 aa)
TBC1D30TBC1 domain family member 30 isoform D. (920 aa)
TBC1D17TBC1 domain family member 17 isoform A. (684 aa)
RAB3IPRab-3A-interacting protein. (433 aa)
RAB21Ras-related protein Rab-21. (217 aa)
Y1Q_0006870Uncharacterized protein. (154 aa)
ST5Suppression of tumorigenicity 5 protein isoform B. (1385 aa)
DENND4B-2Uncharacterized protein. (724 aa)
RAB6A-1Ras-related protein Rab-6A isoform C. (235 aa)
TBC1D10ATBC1 domain family member 10A. (441 aa)
RABEP1Rab GTPase-binding effector protein 1. (849 aa)
RABGEF1Rab5 GDP/GTP exchange factor isoform C. (554 aa)
TBC1D24-2Uncharacterized protein. (613 aa)
ANKRD27Ankyrin repeat domain-containing protein 27 isoform B. (1114 aa)
SH3YL1SH3 domain-containing YSC84-like protein 1. (181 aa)
TRAPPC12Trafficking protein particle complex subunit 12. (836 aa)
DENND2DDENN domain-containing protein 2D. (469 aa)
ZCCHC3Zinc finger CCHC domain-containing protein 3. (302 aa)
MORN4MORN repeat-containing protein 4. (146 aa)
ALS2Alsin. (1647 aa)
RAB17Ras-related protein Rab-17 isoform A. (236 aa)
ULK2Serine/threonine-protein kinase ULK2. (1048 aa)
Y1Q_0021014Uncharacterized protein. (88 aa)
RAB11BRas-related protein Rab-11B. (218 aa)
JPH2Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (761 aa)
DENND1BDENN domain-containing protein 1B isoform A. (742 aa)
RIN2Ras and Rab interactor 2. (918 aa)
RAB12Ras-related protein Rab-12 isoform A. (247 aa)
RAB31Ras-related protein Rab-31. (195 aa)
RAB33BRas-related protein Rab-33B. (210 aa)
RAB6BRas-related protein Rab-6B. (208 aa)
GGA1ADP-ribosylation factor-binding protein GGA1. (669 aa)
DENND5BDENN domain-containing protein 5B isoform B. (1268 aa)
Y1Q_0024233UDENN domain-containing protein. (1010 aa)
Y1Q_0023092RabBD domain-containing protein. (117 aa)
TBC1D16TBC1 domain family member 16 isoform B. (733 aa)
DENND1CDENN domain-containing protein 1C isoform A. (765 aa)
TBC1D17-2Rab-GAP TBC domain-containing protein. (676 aa)
RAB32Ras-related protein Rab-32. (223 aa)
RGP1RAB6A-GEF complex partner protein 2 isoform B. (377 aa)
SYTL2-1Synaptotagmin-like protein 2 isoform A. (1667 aa)
ARMC5-2Armadillo repeat-containing protein 5. (207 aa)
RAB33ARas-related protein Rab-33A. (163 aa)
RAB9BRas-related protein Rab-9B. (178 aa)
RAB39BRas-related protein Rab-39B. (144 aa)
Y1Q_0015540Synaptotagmin-like protein 2. (976 aa)
RAB41Ras-related protein Rab-41 isoform C. (238 aa)
CHMRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (657 aa)
OPTNOptineurin. (546 aa)
GDI2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (444 aa)
RSPH1Radial spoke head 1-like protein. (327 aa)
RAB5BRas-related protein Rab-5B. (215 aa)
ULK1AUnc-51 like autophagy activating kinase 1a isoform A. (1048 aa)
MORN3MORN repeat-containing protein 3. (275 aa)
ANKMY1Ankyrin repeat and MYND domain-containing protein 1. (1024 aa)
TBC1D24TBC1 domain family member 24. (599 aa)
GRTP1Growth hormone-regulated TBC protein 1. (343 aa)
RAB3IL1-1Guanine nucleotide exchange factor for Rab-3A isoform B. (435 aa)
RAB8A-1Ras-related protein Rab-8A isoform B. (274 aa)
RAB2BLRas-related protein Rab-11A-like. (216 aa)
JPH2-2Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (702 aa)
TBC1D12Rab-GAP TBC domain-containing protein. (553 aa)
DENND4CUDENN domain-containing protein. (1770 aa)
GABARAPL2Gamma-aminobutyric acid receptor-associated protein-like 2. (117 aa)
Y1Q_0017108Ras-related protein Rab-35-like. (204 aa)
RAB3GAP2Rab3 GTPase-activating protein non-catalytic subunit isoform C. (1382 aa)
HPS1Hermansky-Pudlak syndrome 1 protein. (716 aa)
SBF2SET binding factor 2 isoform C. (954 aa)
DENND6AProtein DENND6A isoform B. (527 aa)
TBC1D10CCarabin. (526 aa)
LCA5Lebercilin. (645 aa)
RAB10Ras-related protein Rab-10. (189 aa)
GAREM2GRB2-associated and regulator of MAPK protein-like isoform B. (798 aa)
RAB5ARas-related protein Rab-5A. (215 aa)
AKT2Non-specific serine/threonine protein kinase. (270 aa)
Y1Q_0021873Uncharacterized protein. (84 aa)
TRAPPC8Trafficking protein particle complex subunit 8 isoform A. (1404 aa)
Y1Q_0003905Ras-related protein Rab-10-like. (194 aa)
GAREM1GRB2-associated and regulator of MAPK protein. (574 aa)
JPH1Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (665 aa)
RAB15Ras-related protein Rab-15. (212 aa)
RABEP2Rab GTPase-binding effector protein 2 isoform A. (496 aa)
YWHAE14-3-3 protein epsilon; Belongs to the 14-3-3 family. (255 aa)
TBC1D25TBC1 domain family member 25. (458 aa)
TBC1D21TBC1 domain family member 21 isoform B. (362 aa)
RAB7ARas-related protein Rab-7a. (207 aa)
RABGAP1Rab GTPase-activating protein 1 isoform B. (1055 aa)
Y1Q_0004587Uncharacterized protein. (284 aa)
AKT3-2Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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