14 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y1Q_0018673	Uncharacterized protein. (2454 aa)
	EEPD1	Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (559 aa)
	TBL1XR1	F-box-like/WD repeat-containing protein TBL1XR1. (513 aa)
	NR1H3	Oxysterols receptor LXR-alpha. (408 aa)
	ARL4A	ADP-ribosylation factor-like protein 4A. (201 aa)
	CETP-1	Cholesteryl ester transfer protein isoform B. (173 aa)
	TBL1X	Uncharacterized protein. (525 aa)
	GPS2	Inner centromere protein. (286 aa)
	ARL4C	ADP-ribosylation factor-like protein 4C; Belongs to the small GTPase superfamily. Arf family. (196 aa)
	NCOR1	Nuclear receptor corepressor 1 isoform B. (2411 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	Y1Q_0007599	Uncharacterized protein. (420 aa)
	Y1Q_0024039	KIX domain-containing protein. (131 aa)
	HDAC3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (428 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	HDAC3	A0A151NHH3	A0A151NR61	CREB-binding protein isoform C.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.669
CREBBP	NCOR1	A0A151NHH3	A0A151NBD5	CREB-binding protein isoform C.	Nuclear receptor corepressor 1 isoform B.	0.620
CREBBP	NR1H3	A0A151NHH3	A0A151MB42	CREB-binding protein isoform C.	Oxysterols receptor LXR-alpha.	0.550
CREBBP	TBL1X	A0A151NHH3	A0A151N0N2	CREB-binding protein isoform C.	Uncharacterized protein.	0.448
CREBBP	TBL1XR1	A0A151NHH3	A0A151M6C2	CREB-binding protein isoform C.	F-box-like/WD repeat-containing protein TBL1XR1.	0.602
CREBBP	Y1Q_0007599	A0A151NHH3	A0A151LY36	CREB-binding protein isoform C.	Uncharacterized protein.	0.440
CREBBP	Y1Q_0018673	A0A151NHH3	A0A151NRX5	CREB-binding protein isoform C.	Uncharacterized protein.	0.620
GPS2	HDAC3	A0A151N0Z0	A0A151NR61	Inner centromere protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.687
GPS2	NCOR1	A0A151N0Z0	A0A151NBD5	Inner centromere protein.	Nuclear receptor corepressor 1 isoform B.	0.721
GPS2	TBL1X	A0A151N0Z0	A0A151N0N2	Inner centromere protein.	Uncharacterized protein.	0.645
GPS2	TBL1XR1	A0A151N0Z0	A0A151M6C2	Inner centromere protein.	F-box-like/WD repeat-containing protein TBL1XR1.	0.645
GPS2	Y1Q_0018673	A0A151N0Z0	A0A151NRX5	Inner centromere protein.	Uncharacterized protein.	0.721
HDAC3	CREBBP	A0A151NR61	A0A151NHH3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	CREB-binding protein isoform C.	0.669
HDAC3	GPS2	A0A151NR61	A0A151N0Z0	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Inner centromere protein.	0.687
HDAC3	NCOR1	A0A151NR61	A0A151NBD5	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Nuclear receptor corepressor 1 isoform B.	0.936
HDAC3	NR1H3	A0A151NR61	A0A151MB42	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Oxysterols receptor LXR-alpha.	0.479
HDAC3	TBL1X	A0A151NR61	A0A151N0N2	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Uncharacterized protein.	0.858
HDAC3	TBL1XR1	A0A151NR61	A0A151M6C2	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	F-box-like/WD repeat-containing protein TBL1XR1.	0.858
HDAC3	Y1Q_0007599	A0A151NR61	A0A151LY36	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Uncharacterized protein.	0.479
HDAC3	Y1Q_0018673	A0A151NR61	A0A151NRX5	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	Uncharacterized protein.	0.936