16 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYK-2	Tyrosine-protein kinase. (608 aa)
	PIK3CB-2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1071 aa)
	RAPGEF1	Rap guanine nucleotide exchange factor 1. (1071 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	CRK	Adapter molecule crk. (291 aa)
	LYN	Tyrosine-protein kinase. (562 aa)
	Y1Q_0018542	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (627 aa)
	C1GALT1A	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A. (432 aa)
	PIK3R1-2	Uncharacterized protein. (750 aa)
	GRB2	Growth factor receptor-bound protein 2. (217 aa)
	PIK3CD	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1030 aa)
	PIK3R1	Phosphatidylinositol 3-kinase regulatory subunit alpha. (727 aa)
	Y1Q_0003573	SH3 domain-containing protein. (167 aa)
	KXD1	KxDL motif-containing protein 1. (293 aa)
	Y1Q_0003612	Rho-GAP domain-containing protein. (189 aa)
	PIK3CB	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRK	GRB2	A0A151MLC9	A0A151N2T8	Adapter molecule crk.	Growth factor receptor-bound protein 2.	0.917
CRK	LYN	A0A151MLC9	A0A151MNT0	Adapter molecule crk.	Tyrosine-protein kinase.	0.557
CRK	PIK3R1	A0A151MLC9	A0A151N8Y8	Adapter molecule crk.	Phosphatidylinositol 3-kinase regulatory subunit alpha.	0.413
CRK	PIK3R1-2	A0A151MLC9	A0A151MXN9	Adapter molecule crk.	Uncharacterized protein.	0.413
CRK	RAPGEF1	A0A151MLC9	A0A151MFQ4	Adapter molecule crk.	Rap guanine nucleotide exchange factor 1.	0.992
CRK	SYK-2	A0A151MLC9	A0A151M807	Adapter molecule crk.	Tyrosine-protein kinase.	0.602
CRK	Y1Q_0003573	A0A151MLC9	A0A151NGA7	Adapter molecule crk.	SH3 domain-containing protein.	0.413
CRK	Y1Q_0003612	A0A151MLC9	A0A151PFY9	Adapter molecule crk.	Rho-GAP domain-containing protein.	0.413
GRB2	CRK	A0A151N2T8	A0A151MLC9	Growth factor receptor-bound protein 2.	Adapter molecule crk.	0.917
GRB2	KXD1	A0A151N2T8	A0A151NUA6	Growth factor receptor-bound protein 2.	KxDL motif-containing protein 1.	0.641
GRB2	LYN	A0A151N2T8	A0A151MNT0	Growth factor receptor-bound protein 2.	Tyrosine-protein kinase.	0.775
GRB2	PIK3CB	A0A151N2T8	A0A151M6C3	Growth factor receptor-bound protein 2.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.655
GRB2	PIK3CB-2	A0A151N2T8	A0A151M614	Growth factor receptor-bound protein 2.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.587
GRB2	PIK3CD	A0A151N2T8	A0A151N3V4	Growth factor receptor-bound protein 2.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.587
GRB2	PIK3R1	A0A151N2T8	A0A151N8Y8	Growth factor receptor-bound protein 2.	Phosphatidylinositol 3-kinase regulatory subunit alpha.	0.790
GRB2	PIK3R1-2	A0A151N2T8	A0A151MXN9	Growth factor receptor-bound protein 2.	Uncharacterized protein.	0.790
GRB2	RAPGEF1	A0A151N2T8	A0A151MFQ4	Growth factor receptor-bound protein 2.	Rap guanine nucleotide exchange factor 1.	0.876
GRB2	RPS27A	A0A151N2T8	A0A151MGG2	Growth factor receptor-bound protein 2.	Ubiquitin-40S ribosomal protein S27a.	0.657
GRB2	SYK-2	A0A151N2T8	A0A151M807	Growth factor receptor-bound protein 2.	Tyrosine-protein kinase.	0.888
GRB2	Y1Q_0003573	A0A151N2T8	A0A151NGA7	Growth factor receptor-bound protein 2.	SH3 domain-containing protein.	0.790