STRINGSTRING
UBAP1 UBAP1 STAM STAM VPS28 VPS28 CHMP4A CHMP4A MDP1 MDP1 UBAP1L UBAP1L TSG101 TSG101 CHMP2B CHMP2B RPS27A RPS27A STAM-2 STAM-2 Y1Q_0019087 Y1Q_0019087 ZFYVE19 ZFYVE19 ZFYVE1 ZFYVE1 HGS HGS MVB12B MVB12B CUNH17orf75 CUNH17orf75 VPS37D VPS37D TM9SF1 TM9SF1 VPS36 VPS36 VPS4B-2 VPS4B-2 VTA1-1 VTA1-1 VPS4B VPS4B VPS37B VPS37B SCARB1 SCARB1 KXD1 KXD1 MVB12A MVB12A VPS37C VPS37C CHMP6 CHMP6 CHMP2A CHMP2A SNF8 SNF8 CHMP7-1 CHMP7-1 CHMP4B CHMP4B CHMP3 CHMP3 VPS37A-1 VPS37A-1 VPS25 VPS25 CHMP4C CHMP4C CHMP5 CHMP5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBAP1Ubiquitin-associated protein 1. (302 aa)
STAMSignal transducing adapter molecule 1 isoform C. (582 aa)
VPS28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (211 aa)
CHMP4ACharged multivesicular body protein 4a. (218 aa)
MDP1Magnesium-dependent phosphatase 1. (160 aa)
UBAP1LUbiquitin-associated protein 1-like. (528 aa)
TSG101Tumor susceptibility 101 protein. (392 aa)
CHMP2BCharged multivesicular body protein 2b. (214 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
STAM-2Uncharacterized protein. (335 aa)
Y1Q_0019087Uncharacterized protein. (152 aa)
ZFYVE19Abscission/NoCut checkpoint regulator. (429 aa)
ZFYVE1Zinc finger FYVE domain-containing protein 1. (697 aa)
HGSHepatocyte growth factor-regulated tyrosine kinase substrate isoform B. (853 aa)
MVB12BMultivesicular body subunit 12B. (311 aa)
CUNH17orf75Protein Njmu-R1. (388 aa)
VPS37DVacuolar protein sorting-associated protein 37D. (285 aa)
TM9SF1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (683 aa)
VPS36Vacuolar protein-sorting-associated protein 36. (387 aa)
VPS4B-2Uncharacterized protein; Belongs to the AAA ATPase family. (463 aa)
VTA1-1Vacuolar sorting-associated protein VTA1-like protein isoform A. (305 aa)
VPS4BVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (463 aa)
VPS37BVacuolar protein sorting-associated protein 37B. (289 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
MVB12AMultivesicular body subunit 12A. (272 aa)
VPS37CVacuolar protein sorting-associated protein 37C. (269 aa)
CHMP6Charged multivesicular body protein 6. (187 aa)
CHMP2ACharged multivesicular body protein 2a. (220 aa)
SNF8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
CHMP7-1Charged multivesicular body protein 7 isoform A. (398 aa)
CHMP4BCharged multivesicular body protein 4b. (211 aa)
CHMP3Charged multivesicular body protein 3. (220 aa)
VPS37A-1Vacuolar protein sorting-associated protein 37A isoform B. (394 aa)
VPS25Vacuolar protein-sorting-associated protein 25. (174 aa)
CHMP4CCharged multivesicular body protein 4c. (221 aa)
CHMP5Charged multivesicular body protein 5. (219 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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