STRINGSTRING
Y1Q_0013910 Y1Q_0013910 Y1Q_0013534 Y1Q_0013534 CARD8-2 CARD8-2 NLRC5 NLRC5 IKBKG IKBKG Y1Q_0020759 Y1Q_0020759 LRRC74A LRRC74A RPS27A RPS27A TRAF6 TRAF6 LRRC45 LRRC45 Y1Q_0022506 Y1Q_0022506 TONSL TONSL IKBIP IKBIP VWC2 VWC2 Y1Q_0013419 Y1Q_0013419 Y1Q_0022090 Y1Q_0022090 LRRC71 LRRC71 KHNYN KHNYN IKBKB IKBKB Y1Q_0017347 Y1Q_0017347 Y1Q_0020396 Y1Q_0020396 Y1Q_0018841 Y1Q_0018841 Y1Q_0006366 Y1Q_0006366 NLRP3 NLRP3 Y1Q_0006330 Y1Q_0006330 Y1Q_0006368 Y1Q_0006368 TONSLL TONSLL KXD1 KXD1 SCARB1 SCARB1 LRRC14 LRRC14 USP18 USP18 NLRX1 NLRX1 VWC2L VWC2L Y1Q_0018842 Y1Q_0018842 Y1Q_0008580 Y1Q_0008580 N4BP1 N4BP1 USP14 USP14 Y1Q_0020171 Y1Q_0020171 Y1Q_0020172 Y1Q_0020172 Y1Q_0020170 Y1Q_0020170 IKBKB-2 IKBKB-2 LRRC34 LRRC34 LRRC31 LRRC31
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0013910Uncharacterized protein. (179 aa)
Y1Q_0013534NACHT, LRR and PYD domains-containing protein 3-like. (739 aa)
CARD8-2Caspase recruitment domain-containing protein 8. (317 aa)
NLRC5Protein NLRC5 isoform B. (1891 aa)
IKBKGNF-kappa-B essential modulator. (542 aa)
Y1Q_0020759Uncharacterized protein. (171 aa)
LRRC74ALeucine-rich repeat-containing protein 74A isoform A. (478 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (576 aa)
LRRC45Leucine-rich repeat-containing protein 45. (777 aa)
Y1Q_0022506Uncharacterized protein. (167 aa)
TONSLTonsoku-like protein. (412 aa)
IKBIPInhibitor of nuclear factor kappa-B kinase-interacting protein. (334 aa)
VWC2Brorin. (265 aa)
Y1Q_0013419Uncharacterized protein. (77 aa)
Y1Q_0022090Ig-like domain-containing protein. (187 aa)
LRRC71Leucine-rich repeat-containing protein 71 isoform B. (526 aa)
KHNYNProtein KHNYN. (890 aa)
IKBKBInhibitor of nuclear factor kappa-B kinase subunit beta. (730 aa)
Y1Q_0017347NACHT, LRR and PYD domains-containing protein 3-like. (334 aa)
Y1Q_0020396Uncharacterized protein. (1078 aa)
Y1Q_0018841Ig-like domain-containing protein. (665 aa)
Y1Q_0006366Pyrin domain-containing protein. (469 aa)
NLRP3NACHT, LRR and PYD domains-containing protein 12. (901 aa)
Y1Q_0006330Synaptotagmin-2-like. (234 aa)
Y1Q_0006368Ribonuclease inhibitor-like. (770 aa)
TONSLLTonsoku-like protein. (924 aa)
KXD1KxDL motif-containing protein 1. (293 aa)
SCARB1Scavenger receptor class B member 1 isoform A. (959 aa)
LRRC14Leucine-rich repeat-containing protein 14. (511 aa)
USP18Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family. (359 aa)
NLRX1NLR family member X1. (818 aa)
VWC2LVon Willebrand factor C domain-containing protein 2-like. (222 aa)
Y1Q_0018842Uncharacterized protein. (192 aa)
Y1Q_0008580Uncharacterized protein. (441 aa)
N4BP1NEDD4-binding protein 1. (938 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (492 aa)
Y1Q_0020171Uncharacterized protein. (219 aa)
Y1Q_0020172NACHT, LRR and PYD domains-containing protein 12-like. (484 aa)
Y1Q_0020170Pyrin domain-containing protein. (269 aa)
IKBKB-2Uncharacterized protein. (757 aa)
LRRC34Leucine-rich repeat-containing protein 34. (417 aa)
LRRC31Leucine-rich repeat-containing protein 31. (587 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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