48 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMD12	26S proteasome non-ATPase regulatory subunit 12. (441 aa)
	Y1Q_0019034	RPN1_C domain-containing protein. (356 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
	PSMB9	Proteasome subunit beta. (216 aa)
	PSMB8	Proteasome subunit beta. (282 aa)
	BTRC	F-box/WD repeat-containing protein 1A isoform B. (626 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6. (348 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	PSMB7	Proteasome subunit beta. (274 aa)
	PSMD5-1	26S proteasome non-ATPase regulatory subunit 5 isoform B. (837 aa)
	GSK3B-2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (433 aa)
	PSMA1	Proteasome subunit alpha type. (261 aa)
	PSMC3	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (404 aa)
	HYKK	Proteasome endopeptidase complex. (600 aa)
	Y1Q_0005128	Proteasome subunit beta. (277 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (281 aa)
	PSMB1	Proteasome subunit beta. (240 aa)
	PSMA3	Proteasome subunit alpha type. (256 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (460 aa)
	NFE2L2	Nuclear factor erythroid 2-related factor 2. (482 aa)
	PSMD7	26S proteasome non-ATPase regulatory subunit 7. (322 aa)
	PSMC2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
	PSMB5	Proteasome subunit beta type-5. (211 aa)
	PSMD9-1	26S proteasome non-ATPase regulatory subunit 9 isoform B. (205 aa)
	PSMB6	Proteasome subunit beta. (227 aa)
	KXD1	KxDL motif-containing protein 1. (293 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13. (376 aa)
	PSMF1	Proteasome inhibitor PI31 subunit. (273 aa)
	CUL1	Cullin-1; Belongs to the cullin family. (776 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (521 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	NFE2L1	Nuclear factor erythroid 2-related factor 1. (876 aa)
	PSMD2	26S proteasome non-ATPase regulatory subunit 2. (513 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (518 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (257 aa)
	GSK3B	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (413 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMC5	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (411 aa)
	PSMC4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (104 aa)
	PSMA6	Proteasome subunit alpha type. (252 aa)
	PSME2	Proteasome activator complex subunit 2. (242 aa)
	PSME1	Proteasome activator complex subunit 1. (150 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CUL1	A0A151MLH5	A0A151P2L7	F-box/WD repeat-containing protein 1A isoform B.	Cullin-1; Belongs to the cullin family.	0.995
BTRC	GSK3B	A0A151MLH5	A0A151N132	F-box/WD repeat-containing protein 1A isoform B.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.854
BTRC	GSK3B-2	A0A151MLH5	A0A151MD62	F-box/WD repeat-containing protein 1A isoform B.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.854
BTRC	KXD1	A0A151MLH5	A0A151NUA6	F-box/WD repeat-containing protein 1A isoform B.	KxDL motif-containing protein 1.	0.766
BTRC	NFE2L2	A0A151MLH5	A0A151LZY2	F-box/WD repeat-containing protein 1A isoform B.	Nuclear factor erythroid 2-related factor 2.	0.696
BTRC	PSMD14	A0A151MLH5	A0A151M0E7	F-box/WD repeat-containing protein 1A isoform B.	26S proteasome non-ATPase regulatory subunit 14.	0.523
BTRC	RBX1	A0A151MLH5	A0A151NHM4	F-box/WD repeat-containing protein 1A isoform B.	E3 ubiquitin-protein ligase RBX1.	0.976
BTRC	RPS27A	A0A151MLH5	A0A151MGG2	F-box/WD repeat-containing protein 1A isoform B.	Ubiquitin-40S ribosomal protein S27a.	0.768
CUL1	BTRC	A0A151P2L7	A0A151MLH5	Cullin-1; Belongs to the cullin family.	F-box/WD repeat-containing protein 1A isoform B.	0.995
CUL1	GSK3B	A0A151P2L7	A0A151N132	Cullin-1; Belongs to the cullin family.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.755
CUL1	GSK3B-2	A0A151P2L7	A0A151MD62	Cullin-1; Belongs to the cullin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.698
CUL1	HYKK	A0A151P2L7	A0A151M9X3	Cullin-1; Belongs to the cullin family.	Proteasome endopeptidase complex.	0.643
CUL1	KXD1	A0A151P2L7	A0A151NUA6	Cullin-1; Belongs to the cullin family.	KxDL motif-containing protein 1.	0.858
CUL1	NFE2L1	A0A151P2L7	A0A151P5I7	Cullin-1; Belongs to the cullin family.	Nuclear factor erythroid 2-related factor 1.	0.689
CUL1	NFE2L2	A0A151P2L7	A0A151LZY2	Cullin-1; Belongs to the cullin family.	Nuclear factor erythroid 2-related factor 2.	0.690
CUL1	PSMA1	A0A151P2L7	A0A151MC38	Cullin-1; Belongs to the cullin family.	Proteasome subunit alpha type.	0.637
CUL1	PSMA3	A0A151P2L7	A0A151M1V3	Cullin-1; Belongs to the cullin family.	Proteasome subunit alpha type.	0.598
CUL1	PSMA5	A0A151P2L7	A0A151N9J3	Cullin-1; Belongs to the cullin family.	Proteasome subunit alpha type.	0.612
CUL1	PSMA6	A0A151P2L7	A0A151NKD7	Cullin-1; Belongs to the cullin family.	Proteasome subunit alpha type.	0.621
CUL1	PSMB1	A0A151P2L7	A0A151M2R9	Cullin-1; Belongs to the cullin family.	Proteasome subunit beta.	0.613