14 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RBFOX3	RNA binding fox-1-like protein 3. (154 aa)
	Y1Q_0012383	Uncharacterized protein. (85 aa)
	IQSEC1	IQ motif and SEC7 domain-containing protein 1. (553 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator isoform A. (785 aa)
	ARNT2	Uncharacterized protein. (749 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform B. (651 aa)
	Y1Q_0009460	RNA binding fox-1-like protein 3. (109 aa)
	GEM	GTP-binding protein GEM. (337 aa)
	IQSEC3	IQ motif and SEC7 domain-containing protein 3 isoform A. (996 aa)
	NPAS4	Neuronal PAS domain-containing protein 4. (483 aa)
	SYT10	Uncharacterized protein. (522 aa)
	IQSEC3-2	SEC7 domain-containing protein. (1036 aa)
	SYT3	Synaptotagmin-3. (524 aa)
	SYT9	Synaptotagmin-9 isoform C. (514 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNT	NPAS4	A0A151M5M1	A0A151NGI0	Aryl hydrocarbon receptor nuclear translocator isoform A.	Neuronal PAS domain-containing protein 4.	0.940
ARNT2	NPAS4	A0A151M9B3	A0A151NGI0	Uncharacterized protein.	Neuronal PAS domain-containing protein 4.	0.940
ARNTL	NPAS4	A0A151MBX1	A0A151NGI0	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform B.	Neuronal PAS domain-containing protein 4.	0.884
NPAS4	ARNT	A0A151NGI0	A0A151M5M1	Neuronal PAS domain-containing protein 4.	Aryl hydrocarbon receptor nuclear translocator isoform A.	0.940
NPAS4	ARNT2	A0A151NGI0	A0A151M9B3	Neuronal PAS domain-containing protein 4.	Uncharacterized protein.	0.940
NPAS4	ARNTL	A0A151NGI0	A0A151MBX1	Neuronal PAS domain-containing protein 4.	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform B.	0.884
RBFOX3	Y1Q_0009460	A0A151NZ71	A0A151MLZ5	RNA binding fox-1-like protein 3.	RNA binding fox-1-like protein 3.	0.900
Y1Q_0009460	RBFOX3	A0A151MLZ5	A0A151NZ71	RNA binding fox-1-like protein 3.	RNA binding fox-1-like protein 3.	0.900