31 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTPN14	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1182 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (521 aa)
	RBPJ	Recombining binding protein suppressor of hairless isoform B. (498 aa)
	DUSP3	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (184 aa)
	CUL2	Cullin-2; Belongs to the cullin family. (720 aa)
	BRD4	Bromodomain-containing protein 4 isoform B. (1369 aa)
	ENC1-2	BTB domain-containing protein. (615 aa)
	SLC12A8	Solute carrier family 12 member 8 isoform A. (731 aa)
	ENC1	Ectoderm-neural cortex protein 1. (557 aa)
	MAPK6	Mitogen-activated protein kinase 6 isoform A. (628 aa)
	CASP14-2	Uncharacterized protein; Belongs to the peptidase C14A family. (249 aa)
	CNOT4	CCR4-NOT transcription complex subunit 4 isoform A. (762 aa)
	CUL3	Cullin-3; Belongs to the cullin family. (768 aa)
	BLMH	Bleomycin hydrolase; Belongs to the peptidase C1 family. (494 aa)
	TGM3-2	Protein-glutamine gamma-glutamyltransferase E-like. (694 aa)
	TGM3	Protein-glutamine gamma-glutamyltransferase E isoform B. (757 aa)
	TCEB1	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (112 aa)
	HIF1AN	Hypoxia-inducible factor 1-alpha inhibitor. (394 aa)
	UBR4	E3 ubiquitin-protein ligase UBR4 isoform B. (5151 aa)
	NOTCH1	Uncharacterized protein. (2308 aa)
	AAMP	Angio-associated migratory cell protein. (437 aa)
	CEP131	Centrosomal protein of; Belongs to the glycosyltransferase 29 family. (1240 aa)
	KCMF1	E3 ubiquitin-protein ligase KCMF1. (407 aa)
	YES1	Tyrosine-protein kinase. (1013 aa)
	TCEB2	Transcription elongation factor B polypeptide 2. (115 aa)
	CEP63-1	Centrosomal protein of isoform A. (704 aa)
	PTPN13	Tyrosine-protein phosphatase non-receptor type 13 isoform C. (2492 aa)
	PDZD11	PDZ domain-containing protein 11. (140 aa)
	HDAC3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (428 aa)
	SDCBP2	Syntenin-2. (296 aa)
	CASP14	Caspase-14; Belongs to the peptidase C14A family. (359 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAMP	CEP131	A0A151MCJ4	A0A151NC72	Angio-associated migratory cell protein.	Centrosomal protein of; Belongs to the glycosyltransferase 29 family.	0.499
AAMP	CEP63-1	A0A151MCJ4	A0A151NGX0	Angio-associated migratory cell protein.	Centrosomal protein of isoform A.	0.524
AAMP	CNOT4	A0A151MCJ4	A0A151LZ41	Angio-associated migratory cell protein.	CCR4-NOT transcription complex subunit 4 isoform A.	0.418
AAMP	DUSP3	A0A151MCJ4	A0A151PBK6	Angio-associated migratory cell protein.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.684
AAMP	HIF1AN	A0A151MCJ4	A0A151MKS2	Angio-associated migratory cell protein.	Hypoxia-inducible factor 1-alpha inhibitor.	0.501
AAMP	KCMF1	A0A151MCJ4	A0A151NE35	Angio-associated migratory cell protein.	E3 ubiquitin-protein ligase KCMF1.	0.410
AAMP	MAPK6	A0A151MCJ4	A0A151M9M2	Angio-associated migratory cell protein.	Mitogen-activated protein kinase 6 isoform A.	0.579
AAMP	SLC12A8	A0A151MCJ4	A0A151M0W3	Angio-associated migratory cell protein.	Solute carrier family 12 member 8 isoform A.	0.663
AAMP	TGM3	A0A151MCJ4	A0A151MUQ5	Angio-associated migratory cell protein.	Protein-glutamine gamma-glutamyltransferase E isoform B.	0.410
BLMH	CASP14	A0A151N0P4	A0A151P2J1	Bleomycin hydrolase; Belongs to the peptidase C1 family.	Caspase-14; Belongs to the peptidase C14A family.	0.541
BLMH	TGM3	A0A151N0P4	A0A151MUQ5	Bleomycin hydrolase; Belongs to the peptidase C1 family.	Protein-glutamine gamma-glutamyltransferase E isoform B.	0.579
BLMH	TGM3-2	A0A151N0P4	A0A151MUX5	Bleomycin hydrolase; Belongs to the peptidase C1 family.	Protein-glutamine gamma-glutamyltransferase E-like.	0.576
BRD4	RBPJ	A0A151PHI3	A0A151PA20	Bromodomain-containing protein 4 isoform B.	Recombining binding protein suppressor of hairless isoform B.	0.430
CASP14	BLMH	A0A151P2J1	A0A151N0P4	Caspase-14; Belongs to the peptidase C14A family.	Bleomycin hydrolase; Belongs to the peptidase C1 family.	0.541
CASP14	TGM3	A0A151P2J1	A0A151MUQ5	Caspase-14; Belongs to the peptidase C14A family.	Protein-glutamine gamma-glutamyltransferase E isoform B.	0.596
CASP14	TGM3-2	A0A151P2J1	A0A151MUX5	Caspase-14; Belongs to the peptidase C14A family.	Protein-glutamine gamma-glutamyltransferase E-like.	0.510
CASP14-2	TGM3-2	A0A151LY53	A0A151MUX5	Uncharacterized protein; Belongs to the peptidase C14A family.	Protein-glutamine gamma-glutamyltransferase E-like.	0.414
CEP131	AAMP	A0A151NC72	A0A151MCJ4	Centrosomal protein of; Belongs to the glycosyltransferase 29 family.	Angio-associated migratory cell protein.	0.499
CEP131	CEP63-1	A0A151NC72	A0A151NGX0	Centrosomal protein of; Belongs to the glycosyltransferase 29 family.	Centrosomal protein of isoform A.	0.528
CEP131	DUSP3	A0A151NC72	A0A151PBK6	Centrosomal protein of; Belongs to the glycosyltransferase 29 family.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.579