STRINGSTRING
PARK7 PARK7 LETM1 LETM1 PHB PHB DPYSL4 DPYSL4 PSEN1-1 PSEN1-1 COX10 COX10 SDHC SDHC NDUFS1 NDUFS1 FMR1-2 FMR1-2 UQCRFS1 UQCRFS1 HIGD2A HIGD2A NLN NLN NDUFS4 NDUFS4 COX7A2 COX7A2 Y1Q_0019264 Y1Q_0019264 LPCAT4 LPCAT4 PINK1 PINK1 STOM STOM NDUFB4 NDUFB4 UQCRQ UQCRQ OMA1 OMA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PARK7Protein deglycase DJ-1. (159 aa)
LETM1LETM1 and EF-hand domain-containing protein 1, mitochondrial. (754 aa)
PHBProhibitin. (273 aa)
DPYSL4Amidohydro-rel domain-containing protein. (574 aa)
PSEN1-1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (458 aa)
COX10Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (495 aa)
SDHCSuccinate dehydrogenase cytochrome b560 subunit, mitochondrial. (169 aa)
NDUFS1NADH-ubiquinone oxidoreductase subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family. (766 aa)
FMR1-2Uncharacterized protein. (761 aa)
UQCRFS1Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (278 aa)
HIGD2AHIG1 domain family member 2A, mitochondrial. (112 aa)
NLNPeptidase_M3 domain-containing protein. (735 aa)
NDUFS4NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial. (165 aa)
COX7A2Cytochrome c oxidase subunit 7A2, mitochondrial. (89 aa)
Y1Q_0019264Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (129 aa)
LPCAT4Lysophospholipid acyltransferase LPCAT4. (763 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial; Belongs to the arginase family. (851 aa)
STOMErythrocyte band 7 integral membrane protein. (281 aa)
NDUFB4NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4. (134 aa)
UQCRQCytochrome b-c1 complex subunit 8. (82 aa)
OMA1Metalloendopeptidase OMA1, mitochondrial. (504 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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