STRINGSTRING
CYFIP1 CYFIP1 EGR1 EGR1 FZD9 FZD9 BAZ1B BAZ1B LIMK2 LIMK2 NIPA1 NIPA1 TUBGCP5 TUBGCP5 CYFIP1-2 CYFIP1-2 NIPA2 NIPA2 ROBO1 ROBO1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYFIP1Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
EGR1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (429 aa)
FZD9Frizzled-9; Belongs to the G-protein coupled receptor Fz/Smo family. (584 aa)
BAZ1BTyrosine-protein kinase BAZ1B. (1489 aa)
LIMK2LIM domain kinase 2. (636 aa)
NIPA1Magnesium transporter NIPA1. (317 aa)
TUBGCP5Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (1037 aa)
CYFIP1-2Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1289 aa)
NIPA2Magnesium transporter NIPA2. (374 aa)
ROBO1Uncharacterized protein. (1504 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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