STRINGSTRING
RAB1A RAB1A DDR2 DDR2 IL6 IL6 CTSC CTSC TFRC TFRC ACE2 ACE2 TLR7-1 TLR7-1 TMEM27 TMEM27 TYK2 TYK2 IRF3 IRF3 Y1Q_0018253 Y1Q_0018253 KDM5B KDM5B CCL20 CCL20 CCL20-2 CCL20-2 STAT1 STAT1 IL18 IL18 CTSB CTSB ZBTB16 ZBTB16 LZTFL1 LZTFL1 DPP9-2 DPP9-2 SLC6A20-2 SLC6A20-2 STAT3 STAT3 TLR3 TLR3 TLL1-2 TLL1-2 ACE ACE MYD88 MYD88 TBK1 TBK1 CYP2D6-1 CYP2D6-1 REXO2 REXO2 CADM1 CADM1 DPP4 DPP4 DPP4-2 DPP4-2 HDAC2 HDAC2 IRF1 IRF1 IL10 IL10 REN REN CD4 CD4 IFNAR2-1 IFNAR2-1 TMPRSS2 TMPRSS2 IFNAR1 IFNAR1 TLR4 TLR4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAB1ARas-related protein Rab-1A. (205 aa)
DDR2Discoidin domain-containing receptor 2 isoform A. (941 aa)
IL6Interleukin-6. (178 aa)
CTSCDipeptidyl peptidase 1; Belongs to the peptidase C1 family. (475 aa)
TFRCTransferrin receptor protein 1. (779 aa)
ACE2Angiotensin-converting enzyme. (805 aa)
TLR7-1Toll-like receptor 7 isoform B. (505 aa)
TMEM27Collectrin. (251 aa)
TYK2Tyrosine-protein kinase. (1184 aa)
IRF3Interferon regulatory factor 3 isoform B. (462 aa)
Y1Q_0018253Uncharacterized protein; Belongs to the peptidase S8 family. (460 aa)
KDM5BLysine-specific demethylase 5B isoform A. (1519 aa)
CCL20C-C motif chemokine. (86 aa)
CCL20-2C-C motif chemokine. (102 aa)
STAT1Signal transducer and activator of transcription. (753 aa)
IL18Interleukin-18. (239 aa)
CTSBCathepsin B; Belongs to the peptidase C1 family. (400 aa)
ZBTB16Zinc finger and BTB domain-containing protein 16. (666 aa)
LZTFL1Leucine zipper transcription factor-like protein 1. (296 aa)
DPP9-2Uncharacterized protein; Belongs to the peptidase S9B family. (860 aa)
SLC6A20-2Uncharacterized protein. (556 aa)
STAT3Signal transducer and activator of transcription. (727 aa)
TLR3Toll-like receptor 3; Belongs to the Toll-like receptor family. (948 aa)
TLL1-2Metalloendopeptidase. (1004 aa)
ACEAngiotensin-converting enzyme. (1244 aa)
MYD88Myeloid differentiation primary response protein MyD88. (203 aa)
TBK1Serine/threonine-protein kinase TBK1. (677 aa)
CYP2D6-1Cytochrome P450 2D6 isoform B; Belongs to the cytochrome P450 family. (533 aa)
REXO2Oligoribonuclease, mitochondrial. (186 aa)
CADM1Cell adhesion molecule 1 isoform B. (431 aa)
DPP4Dipeptidyl peptidase 4; Belongs to the peptidase S9B family. (757 aa)
DPP4-2Uncharacterized protein; Belongs to the peptidase S9B family. (992 aa)
HDAC2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (488 aa)
IRF1Interferon regulatory factor 1 isoform A. (430 aa)
IL10Interleukin-10. (93 aa)
RENRenin; Belongs to the peptidase A1 family. (400 aa)
CD4T-cell surface glycoprotein CD4. (551 aa)
IFNAR2-1Interferon alpha/beta receptor 2 isoform B. (313 aa)
TMPRSS2Transmembrane protease serine 2; Belongs to the peptidase S1 family. (539 aa)
IFNAR1Interferon alpha/beta receptor 1. (569 aa)
TLR4Toll-like receptor 4; Belongs to the Toll-like receptor family. (843 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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