STRINGSTRING
PASD1-2 PASD1-2 Y1Q_0011568 Y1Q_0011568 KCNH5 KCNH5 ARNT ARNT Y1Q_0021893 Y1Q_0021893 ARNT2 ARNT2 PDE8B PDE8B ARNTL ARNTL Y1Q_0002875 Y1Q_0002875 SIM2 SIM2 PASK PASK NCOA2 NCOA2 AHR AHR HIF3A-1 HIF3A-1 HIF1A HIF1A Y1Q_0008691 Y1Q_0008691 AHR2 AHR2 AHRR AHRR NPAS4 NPAS4 NPAS3 NPAS3 SIM1 SIM1 PER1 PER1 EPAS1 EPAS1 NPAS2 NPAS2 NCOA3 NCOA3 NCOA1 NCOA1 KCNH1 KCNH1 NPAS1 NPAS1 PASD1 PASD1 KCNH8 KCNH8 Y1Q_0003978 Y1Q_0003978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PASD1-2Uncharacterized protein. (822 aa)
Y1Q_0011568Potassium voltage-gated channel subfamily H member 7-like. (122 aa)
KCNH5Uncharacterized protein. (989 aa)
ARNTAryl hydrocarbon receptor nuclear translocator isoform A. (785 aa)
Y1Q_0021893PAS domain-containing protein. (1057 aa)
ARNT2Uncharacterized protein. (749 aa)
PDE8BPhosphodiesterase. (768 aa)
ARNTLAryl hydrocarbon receptor nuclear translocator-like protein 1 isoform B. (651 aa)
Y1Q_0002875Uncharacterized protein. (581 aa)
SIM2Single-minded-like protein 2. (768 aa)
PASKPAS domain-containing serine/threonine-protein kinase. (1329 aa)
NCOA2Nuclear receptor coactivator. (1457 aa)
AHRAryl hydrocarbon receptor. (522 aa)
HIF3A-1Hypoxia-inducible factor 3-alpha isoform C. (374 aa)
HIF1AUncharacterized protein. (747 aa)
Y1Q_0008691Uncharacterized protein. (686 aa)
AHR2Aryl hydrocarbon receptor 2. (1104 aa)
AHRRAryl hydrocarbon receptor repressor isoform A. (577 aa)
NPAS4Neuronal PAS domain-containing protein 4. (483 aa)
NPAS3Neuronal PAS domain-containing protein 3 isoform B. (925 aa)
SIM1Uncharacterized protein. (766 aa)
PER1Period circadian protein-like protein 3. (1366 aa)
EPAS1Endothelial PAS domain-containing protein 1. (863 aa)
NPAS2Uncharacterized protein. (936 aa)
NCOA3Nuclear receptor coactivator 3 isoform B. (1141 aa)
NCOA1Nuclear receptor coactivator 1 isoform A. (1274 aa)
KCNH1Potassium voltage-gated channel subfamily H member 1. (959 aa)
NPAS1Neuronal PAS domain-containing protein 1. (847 aa)
PASD1Circadian clock protein PASD1. (732 aa)
KCNH8Potassium voltage-gated channel subfamily H member 8 isoform A. (1163 aa)
Y1Q_0003978Phosphodiesterase. (876 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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