13 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NSD2	Uncharacterized protein. (1370 aa)
	ZMYND11	Zinc finger MYND domain-containing protein 11 isoform A. (643 aa)
	HDGF	Hepatoma-derived growth factor. (235 aa)
	BRD1	Uncharacterized protein. (734 aa)
	MAPK13	Mitogen-activated protein kinase. (1546 aa)
	NSD3	Uncharacterized protein. (1430 aa)
	DNMT3B	DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (727 aa)
	MSH6	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1340 aa)
	DNMT3B-2	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (858 aa)
	BRPF1	Uncharacterized protein. (1677 aa)
	HDGFRP2	Hepatoma-derived growth factor-related protein 2. (649 aa)
	WHSC1	Histone-lysine N-methyltransferase NSD2. (764 aa)
	PSIP1	PC4 and SFRS1-interacting protein isoform B. (602 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRD1	BRPF1	A0A151PFC5	A0A151MRL3	Uncharacterized protein.	Uncharacterized protein.	0.536
BRD1	MAPK13	A0A151PFC5	A0A151N932	Uncharacterized protein.	Mitogen-activated protein kinase.	0.742
BRPF1	BRD1	A0A151MRL3	A0A151PFC5	Uncharacterized protein.	Uncharacterized protein.	0.536
BRPF1	MAPK13	A0A151MRL3	A0A151N932	Uncharacterized protein.	Mitogen-activated protein kinase.	0.623
DNMT3B	DNMT3B-2	A0A151NPB5	A0A151MIG5	DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.904
DNMT3B	WHSC1	A0A151NPB5	A0A151N3F5	DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Histone-lysine N-methyltransferase NSD2.	0.424
DNMT3B-2	DNMT3B	A0A151MIG5	A0A151NPB5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.904
DNMT3B-2	WHSC1	A0A151MIG5	A0A151N3F5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Histone-lysine N-methyltransferase NSD2.	0.476
MAPK13	BRD1	A0A151N932	A0A151PFC5	Mitogen-activated protein kinase.	Uncharacterized protein.	0.742
MAPK13	BRPF1	A0A151N932	A0A151MRL3	Mitogen-activated protein kinase.	Uncharacterized protein.	0.623
WHSC1	DNMT3B	A0A151N3F5	A0A151NPB5	Histone-lysine N-methyltransferase NSD2.	DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.424
WHSC1	DNMT3B-2	A0A151N3F5	A0A151MIG5	Histone-lysine N-methyltransferase NSD2.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.476