38 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRIM24-2	Uncharacterized protein. (951 aa)
	ZMYND8	Protein kinase C-binding protein 1 isoform A. (1197 aa)
	TRIM28	Transcription intermediary factor 1-beta isoform C. (823 aa)
	DHX58	Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family. (1743 aa)
	ZMYND11	Zinc finger MYND domain-containing protein 11 isoform A. (643 aa)
	BRD1	Uncharacterized protein. (734 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3387 aa)
	BRD9	Bromodomain-containing protein 9 isoform B. (673 aa)
	TRIM24	Transcription intermediary factor 1-alpha isoform A. (1074 aa)
	BRD4	Bromodomain-containing protein 4 isoform B. (1369 aa)
	ATAD2B-2	Bromo domain-containing protein. (1418 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A. (1581 aa)
	SMARCA2	Putative global transcription activator SNF2L2. (1430 aa)
	TRIM66	Tripartite motif-containing protein 66 isoform A. (1181 aa)
	BRWD1	Uncharacterized protein. (2471 aa)
	BRD3A	Bromodomain-containing protein 3. (687 aa)
	BAZ2B	Bromodomain adjacent to zinc finger domain protein 2B. (2762 aa)
	BRD8-2	Bromodomain-containing protein 8-like. (373 aa)
	BRDT	Bromodomain testis-specific protein isoform B. (894 aa)
	BRD8	Bromodomain-containing protein 8. (917 aa)
	KAT2B	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (783 aa)
	CECR2	Cat eye syndrome critical region protein 2. (1469 aa)
	BRD3	Bromodomain-containing protein 3 isoform B. (789 aa)
	BRPF1	Uncharacterized protein. (1677 aa)
	BRD7	Bromodomain-containing protein 7 isoform A. (664 aa)
	BRWD3	Uncharacterized protein. (1554 aa)
	TAF1	Transcription initiation factor TFIID subunit. (1966 aa)
	SMARCA4	Uncharacterized protein. (1610 aa)
	BAZ1B	Tyrosine-protein kinase BAZ1B. (1489 aa)
	MAPK13	Mitogen-activated protein kinase. (1546 aa)
	ASH1L	Histone-lysine N-methyltransferase ASH1L isoform A. (1798 aa)
	BPTF	Nucleosome-remodeling factor subunit BPTF. (2737 aa)
	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A. (1718 aa)
	PHIP	PH-interacting protein isoform B. (1788 aa)
	ATAD2B	ATPase family AAA domain-containing protein 2B. (1982 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	CREBBPA	CREB-binding protein isoform A. (1756 aa)
	PBRM1	Protein polybromo-1 isoform A. (1589 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASH1L	BPTF	A0A151N706	A0A151N2C6	Histone-lysine N-methyltransferase ASH1L isoform A.	Nucleosome-remodeling factor subunit BPTF.	0.465
ASH1L	BRD1	A0A151N706	A0A151PFC5	Histone-lysine N-methyltransferase ASH1L isoform A.	Uncharacterized protein.	0.421
ASH1L	BRPF1	A0A151N706	A0A151MRL3	Histone-lysine N-methyltransferase ASH1L isoform A.	Uncharacterized protein.	0.421
ASH1L	KMT2A	A0A151N706	A0A151PFN1	Histone-lysine N-methyltransferase ASH1L isoform A.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.487
ASH1L	MAPK13	A0A151N706	A0A151N932	Histone-lysine N-methyltransferase ASH1L isoform A.	Mitogen-activated protein kinase.	0.421
BAZ1A	CECR2	A0A151NKF5	A0A151NIJ3	Bromodomain adjacent to zinc finger domain protein 1A.	Cat eye syndrome critical region protein 2.	0.565
BAZ1B	CECR2	A0A151N9J8	A0A151NIJ3	Tyrosine-protein kinase BAZ1B.	Cat eye syndrome critical region protein 2.	0.443
BAZ1B	CREBBP	A0A151N9J8	A0A151NHH3	Tyrosine-protein kinase BAZ1B.	CREB-binding protein isoform C.	0.545
BAZ1B	CREBBPA	A0A151N9J8	A0A151NHE3	Tyrosine-protein kinase BAZ1B.	CREB-binding protein isoform A.	0.509
BAZ1B	DHX58	A0A151N9J8	A0A151PCM0	Tyrosine-protein kinase BAZ1B.	Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family.	0.527
BAZ1B	KAT2B	A0A151N9J8	A0A151MQU0	Tyrosine-protein kinase BAZ1B.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.527
BPTF	ASH1L	A0A151N2C6	A0A151N706	Nucleosome-remodeling factor subunit BPTF.	Histone-lysine N-methyltransferase ASH1L isoform A.	0.465
BRD1	ASH1L	A0A151PFC5	A0A151N706	Uncharacterized protein.	Histone-lysine N-methyltransferase ASH1L isoform A.	0.421
BRD1	BRD7	A0A151PFC5	A0A151MRY2	Uncharacterized protein.	Bromodomain-containing protein 7 isoform A.	0.510
BRD1	BRD9	A0A151PFC5	A0A151PH64	Uncharacterized protein.	Bromodomain-containing protein 9 isoform B.	0.627
BRD1	BRPF1	A0A151PFC5	A0A151MRL3	Uncharacterized protein.	Uncharacterized protein.	0.536
BRD1	MAPK13	A0A151PFC5	A0A151N932	Uncharacterized protein.	Mitogen-activated protein kinase.	0.742
BRD3	TAF1	A0A151MRD0	A0A151NTA1	Bromodomain-containing protein 3 isoform B.	Transcription initiation factor TFIID subunit.	0.582
BRD3A	TAF1	A0A151MG60	A0A151NTA1	Bromodomain-containing protein 3.	Transcription initiation factor TFIID subunit.	0.582
BRD4	TAF1	A0A151PHI3	A0A151NTA1	Bromodomain-containing protein 4 isoform B.	Transcription initiation factor TFIID subunit.	0.582