STRINGSTRING
YTHDC2 YTHDC2 Y1Q_0019953 Y1Q_0019953 DHX58 DHX58 DHX35 DHX35 DDX24 DDX24 DICER1 DICER1 TDRD9 TDRD9 ERCC6L ERCC6L DDX10 DDX10 Y1Q_0006611 Y1Q_0006611 DHX38 DHX38 SRCAP SRCAP DDX6 DDX6 DDX39A DDX39A HELQ HELQ DDX49 DDX49 DDX50-2 DDX50-2 DDX50 DDX50 DHX35-2 DHX35-2 BTAF1 BTAF1 SMARCA4 SMARCA4 ERCC6 ERCC6 DDX19B DDX19B DHX9 DHX9 CHD7 CHD7 SETX SETX DDX31 DDX31 RAD54L2 RAD54L2 POLQ POLQ CHD1L CHD1L TTF2 TTF2 CHD3 CHD3 DDX23 DDX23 CHD2 CHD2 SMARCA2 SMARCA2 ERCC6L2 ERCC6L2 SMARCA5-2 SMARCA5-2 DDX46 DDX46 EIF4A3 EIF4A3 DDX41 DDX41 HFM1 HFM1 SKIV2L SKIV2L DHX57 DHX57 EIF4A3-2 EIF4A3-2 SMARCAL1 SMARCAL1 ERCC3 ERCC3 DDX18 DDX18 ASCC3-2 ASCC3-2 Y1Q_0018642 Y1Q_0018642 DDX55 DDX55 EP400 EP400 DDX3X DDX3X SMARCA5 SMARCA5 ATRX ATRX SMARCAD1 SMARCAD1 RECQL4 RECQL4 Y1Q_0024365 Y1Q_0024365 DDX17-2 DDX17-2 DDX11 DDX11 RAD54L RAD54L DDX25 DDX25 CHD8 CHD8 DDX58 DDX58 DDX59 DDX59 DHX36 DHX36 HLTF HLTF DHX30 DHX30 BRIP1 BRIP1 DHX40 DHX40 DDX52 DDX52 WRN WRN DHX33 DHX33 DDX54 DDX54 DDX51 DDX51 CHD3-2 CHD3-2 Y1Q_0021242 Y1Q_0021242 HELLS HELLS BLM BLM DDX20 DDX20 DDX43 DDX43 DDX27 DDX27 INO80 INO80 DDX4 DDX4 DHX29 DHX29 CHD5 CHD5 RECQL5 RECQL5 DDX17 DDX17 TNFRSF6B TNFRSF6B ERCC2 ERCC2 RAD54B RAD54B Y1Q_0003810 Y1Q_0003810 DDX56 DDX56 ASCC3 ASCC3 IFIH1 IFIH1 DDX47 DDX47 SKIV2L2 SKIV2L2 CHD1 CHD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YTHDC2Putative ATP-dependent RNA helicase YTHDC2. (1413 aa)
Y1Q_0019953Helicase ATP-binding domain-containing protein. (288 aa)
DHX58Putative ATP-dependent RNA helicase DHX58 isoform E; Belongs to the small heat shock protein (HSP20) family. (1743 aa)
DHX35Putative ATP-dependent RNA helicase DHX35. (1194 aa)
DDX24ATP-dependent RNA helicase DDX24; Belongs to the DEAD box helicase family. (725 aa)
DICER1Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1919 aa)
TDRD9Putative ATP-dependent RNA helicase TDRD9. (1375 aa)
ERCC6LDNA excision repair protein ERCC-6-like. (694 aa)
DDX10RNA helicase. (864 aa)
Y1Q_0006611Uncharacterized protein; Belongs to the DEAD box helicase family. (384 aa)
DHX38Uncharacterized protein. (1102 aa)
SRCAPHelicase SRCAP. (1772 aa)
DDX6Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (483 aa)
DDX39AATP-dependent RNA helicase DDX39A isoform A. (459 aa)
HELQHelicase POLQ-like isoform A. (1053 aa)
DDX49Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (479 aa)
DDX50-2Uncharacterized protein. (684 aa)
DDX50Nucleolar RNA helicase 2. (692 aa)
DHX35-2Uncharacterized protein. (712 aa)
BTAF1TATA-binding protein-associated factor 172. (1844 aa)
SMARCA4Uncharacterized protein. (1610 aa)
ERCC6DNA excision repair protein ERCC-6. (1491 aa)
DDX19BUncharacterized protein. (479 aa)
DHX9ATP-dependent RNA helicase A. (1546 aa)
CHD7Chromodomain-helicase-DNA-binding protein 7 isoform A. (2554 aa)
SETXPutative helicase senataxin. (1732 aa)
DDX31RNA helicase. (715 aa)
RAD54L2Helicase ARIP4 isoform A. (1433 aa)
POLQDNA polymerase theta isoform A. (1699 aa)
CHD1LChromodomain-helicase-DNA-binding protein 1-like. (887 aa)
TTF2Transcription termination factor 2. (1196 aa)
CHD3Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
DDX23Putative ATP-dependent RNA helicase DDX23. (816 aa)
CHD2Chromodomain-helicase-DNA-binding protein 2 isoform A. (1799 aa)
SMARCA2Putative global transcription activator SNF2L2. (1430 aa)
ERCC6L2DNA excision repair protein ERCC-6-like 2. (1396 aa)
SMARCA5-2Uncharacterized protein. (1027 aa)
DDX46Putative ATP-dependent RNA helicase DDX46. (1038 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (407 aa)
DDX41Putative ATP-dependent RNA helicase DDX41. (496 aa)
HFM1Putative ATP-dependent DNA helicase HFM1 isoform A. (735 aa)
SKIV2LHelicase SKI2W. (1202 aa)
DHX57Uncharacterized protein. (1322 aa)
EIF4A3-2Uncharacterized protein; Belongs to the DEAD box helicase family. (409 aa)
SMARCAL1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (792 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (779 aa)
DDX18RNA helicase. (654 aa)
ASCC3-2Uncharacterized protein. (2288 aa)
Y1Q_0018642Uncharacterized protein. (841 aa)
DDX55RNA helicase. (540 aa)
EP400E1A-binding protein p400 isoform A. (3038 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform D; Belongs to the DEAD box helicase family. (724 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1053 aa)
ATRXTranscriptional regulator ATRX. (2331 aa)
SMARCAD1annotation not available (1108 aa)
RECQL4ATP-dependent DNA helicase Q4 isoform A. (1385 aa)
Y1Q_0024365Helicase ATP-binding domain-containing protein. (362 aa)
DDX17-2Uncharacterized protein; Belongs to the DEAD box helicase family. (658 aa)
DDX11Putative ATP-dependent RNA helicase DDX11 isoform B. (888 aa)
RAD54LDNA repair and recombination protein RAD54-like. (757 aa)
DDX25ATP-dependent RNA helicase DDX25. (453 aa)
CHD8Uncharacterized protein. (2136 aa)
DDX58Putative ATP-dependent RNA helicase DDX58. (928 aa)
DDX59Putative ATP-dependent RNA helicase DDX59; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1894 aa)
DHX36ATP-dependent RNA helicase DHX36. (991 aa)
HLTFHelicase-like transcription factor. (990 aa)
DHX30Putative ATP-dependent RNA helicase DHX30 isoform A. (1184 aa)
BRIP1Fanconi anemia group J protein isoform A. (1463 aa)
DHX40Putative ATP-dependent RNA helicase DHX40. (806 aa)
DDX52Putative ATP-dependent RNA helicase DDX52. (612 aa)
WRNWerner syndrome ATP-dependent helicase. (1443 aa)
DHX33Uncharacterized protein. (863 aa)
DDX54ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (806 aa)
DDX51ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family. (735 aa)
CHD3-2Uncharacterized protein. (1966 aa)
Y1Q_0021242Uncharacterized protein. (2146 aa)
HELLSLymphoid-specific helicase isoform B. (844 aa)
BLMBloom syndrome protein. (1213 aa)
DDX20Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family. (475 aa)
DDX43Putative ATP-dependent RNA helicase DDX43 isoform A; Belongs to the potassium channel family. (1037 aa)
DDX27Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. (669 aa)
INO80DNA helicase INO80. (1539 aa)
DDX4Putative ATP-dependent RNA helicase DDX4 isoform A; Belongs to the DEAD box helicase family. (694 aa)
DHX29ATP-dependent RNA helicase DHX29 isoform B. (1203 aa)
CHD5Uncharacterized protein. (1864 aa)
RECQL5ATP-dependent DNA helicase Q5 isoform B. (1082 aa)
DDX17Putative ATP-dependent RNA helicase DDX17 isoform B; Belongs to the DEAD box helicase family. (605 aa)
TNFRSF6BRegulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1658 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (795 aa)
RAD54BDNA repair and recombination protein RAD54B isoform B. (984 aa)
Y1Q_0003810Uncharacterized protein. (2463 aa)
DDX56Putative ATP-dependent RNA helicase DDX56. (551 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (2136 aa)
IFIH1Interferon-induced helicase C domain-containing protein 1. (986 aa)
DDX47Putative ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (380 aa)
SKIV2L2Superkiller viralicidic activity 2-like 2. (1033 aa)
CHD1Uncharacterized protein. (1812 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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