103 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL27A	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	RPL37A	60S ribosomal protein L37a. (92 aa)
	MRPS5-1	28S ribosomal protein S5, mitochondrial isoform A; Belongs to the universal ribosomal protein uS5 family. (477 aa)
	MRPS16	28S ribosomal protein S16, mitochondrial. (104 aa)
	MRPL18	39S ribosomal protein L18, mitochondrial. (188 aa)
	RPS3	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (278 aa)
	RPL5	60S ribosomal protein L5. (317 aa)
	MRPL9	39S ribosomal protein L9, mitochondrial. (243 aa)
	RPL26L1	60S ribosomal protein L26-like 1. (116 aa)
	RPL4	60S ribosomal protein L4. (363 aa)
	MRPS11	28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family. (190 aa)
	RSL24D1	Putative ribosome biogenesis protein RLP24. (163 aa)
	RPS27L	40S ribosomal protein S27. (84 aa)
	MRPS21	28S ribosomal protein S21, mitochondrial. (115 aa)
	RPS13	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (147 aa)
	MRPL2	39S ribosomal protein L2, mitochondrial isoform A. (543 aa)
	MRPL23	39S ribosomal protein L23, mitochondrial. (175 aa)
	RPL24	60S ribosomal protein L24. (157 aa)
	MRPS6	28S ribosomal protein S6, mitochondrial. (163 aa)
	MRPL22	39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (217 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (147 aa)
	RPL7A	60S ribosomal protein L7a. (266 aa)
	MRPS2	28S ribosomal protein S2, mitochondrial. (274 aa)
	RPL18	60S ribosomal protein L18. (188 aa)
	RPL28	60S ribosomal protein L28. (153 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	RPL22L1	60S ribosomal protein L22-like 1. (121 aa)
	MRPS18A	28S ribosomal protein S18a, mitochondrial. (192 aa)
	MRPL14	39S ribosomal protein L14, mitochondrial. (167 aa)
	MRPS14	28S ribosomal protein S14, mitochondrial. (128 aa)
	RPL34	60S ribosomal protein L34. (117 aa)
	RPL11-1	60S ribosomal protein L11 isoform A; Belongs to the universal ribosomal protein uL5 family. (179 aa)
	RPL7	60S ribosomal protein L7. (223 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	MRPL1	39S ribosomal protein L1, mitochondrial. (324 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (186 aa)
	RPL14	60S ribosomal protein L14. (139 aa)
	RPL21	60S ribosomal protein L21. (147 aa)
	RPS24-1	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	RPL23A	60S ribosomal protein L23a. (144 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (126 aa)
	RPL17	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (264 aa)
	RPL37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	MRPL13	39S ribosomal protein L13, mitochondrial. (179 aa)
	RPL30	60S ribosomal protein L30. (175 aa)
	RPL35	60S ribosomal protein L35. (123 aa)
	RPL3	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (407 aa)
	RPS2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (221 aa)
	MRPS7	28S ribosomal protein S7, mitochondrial. (233 aa)
	RPL22	60S ribosomal protein L22. (125 aa)
	MRPL20	39S ribosomal protein L20, mitochondrial. (159 aa)
	RPLP0	60S acidic ribosomal protein P0. (367 aa)
	MRPS17	28S ribosomal protein S17, mitochondrial. (116 aa)
	RPS18	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	Y1Q_0014921	Patatin-like phospholipase domain-containing protein 1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (391 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (186 aa)
	RPL3-2	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	RPL13A	60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (203 aa)
	MRPS12	28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family. (111 aa)
	RPL36A	60S ribosomal protein L36a isoform B; Belongs to the eukaryotic ribosomal protein eL42 family. (150 aa)
	RPL8	60S ribosomal protein L8. (267 aa)
	MRPL34	39S ribosomal protein L34, mitochondrial. (127 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	MRPS9	28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (368 aa)
	RPL31	60S ribosomal protein L31. (180 aa)
	MRPL30	39S ribosomal protein L30, mitochondrial. (158 aa)
	RPLP2	60S acidic ribosomal protein P2 isoform A; Belongs to the eukaryotic ribosomal protein P1/P2 family. (141 aa)
	MRPL21-1	39S ribosomal protein L21, mitochondrial isoform A. (213 aa)
	MRPL16	39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (248 aa)
	RPS10	40S ribosomal protein S10. (195 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	Y1Q_0006618	Plectin-like. (176 aa)
	MRPS18C	28S ribosomal protein S18c, mitochondrial. (138 aa)
	MRPL17	39S ribosomal protein L17, mitochondrial. (165 aa)
	MRPL32	39S ribosomal protein L32, mitochondrial. (181 aa)
	RPS6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	MRPL3	39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family. (350 aa)
	MRPS10	28S ribosomal protein S10, mitochondrial. (287 aa)
	MRPL11	39S ribosomal protein L11, mitochondrial. (119 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPL23	60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	MRPL10	39S ribosomal protein L10, mitochondrial. (223 aa)
	RPS9	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	MRPL28	39S ribosomal protein L28, mitochondrial. (249 aa)
	RPS11	40S ribosomal protein S11 isoform A; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPS4X	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (280 aa)
	RPLP1	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	MRPL35	39S ribosomal protein L35, mitochondrial. (168 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (170 aa)
	RPS8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	MRPL24	39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family. (210 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (167 aa)
	RPS15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (161 aa)
	MRPL4	39S ribosomal protein L4, mitochondrial. (300 aa)
	RPS23	40S ribosomal protein S23 isoform A; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	RPS27	40S ribosomal protein S27. (84 aa)
	MRPL19	39S ribosomal protein L19, mitochondrial. (269 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAU	MRPL1	A0A151MTP7	A0A151MPS3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L1, mitochondrial.	0.996
FAU	MRPL11	A0A151MTP7	A0A151P4Q6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L11, mitochondrial.	0.994
FAU	MRPL13	A0A151MTP7	A0A151MXG6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L13, mitochondrial.	0.999
FAU	MRPL16	A0A151MTP7	A0A151NXW0	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.	0.992
FAU	MRPL2	A0A151MTP7	A0A151MCL3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L2, mitochondrial isoform A.	0.997
FAU	MRPL22	A0A151MTP7	A0A151MEF3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.	0.997
FAU	MRPL24	A0A151MTP7	A0A151PE40	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.	0.999
FAU	MRPL3	A0A151MTP7	A0A151P3M9	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.	0.989
FAU	MRPL4	A0A151MTP7	A0A151PFZ4	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	39S ribosomal protein L4, mitochondrial.	0.999
FAU	MRPS10	A0A151MTP7	A0A151P3V9	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S10, mitochondrial.	0.999
FAU	MRPS11	A0A151MTP7	A0A151M965	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.	0.999
FAU	MRPS12	A0A151MTP7	A0A151NM33	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	0.999
FAU	MRPS14	A0A151MTP7	A0A151MIG2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S14, mitochondrial.	0.999
FAU	MRPS2	A0A151MTP7	A0A151MFV5	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S2, mitochondrial.	0.998
FAU	MRPS5-1	A0A151MTP7	A0A151M1K7	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S5, mitochondrial isoform A; Belongs to the universal ribosomal protein uS5 family.	0.999
FAU	MRPS7	A0A151MTP7	A0A151N2Z3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	28S ribosomal protein S7, mitochondrial.	0.999
FAU	RPL11-1	A0A151MTP7	A0A151MML3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	60S ribosomal protein L11 isoform A; Belongs to the universal ribosomal protein uL5 family.	0.999
FAU	RPL12	A0A151MTP7	A0A151MEY3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.996
FAU	RPL13A	A0A151MTP7	A0A151NK46	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
FAU	RPL14	A0A151MTP7	A0A151MR19	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	60S ribosomal protein L14.	0.999