STRINGSTRING
ERCC3 ERCC3 TBPL2 TBPL2 GTF2H5 GTF2H5 TBP TBP TAF5L TAF5L TBPL1 TBPL1 TAF6L TAF6L GTF2B GTF2B GTF2H4 GTF2H4 GTF2A2 GTF2A2 GTF2H1 GTF2H1 TAF13 TAF13 GTF2E1 GTF2E1 GTF2F2 GTF2F2 TAF15 TAF15 TAF6-1 TAF6-1 TAF2 TAF2 TAF10 TAF10 ERCC2 ERCC2 MNAT1 MNAT1 GTF2IRD1 GTF2IRD1 Y1Q_0007802 Y1Q_0007802 TAF8-1 TAF8-1 TAF7L TAF7L TAF9B TAF9B GTF2H3 GTF2H3 TAF1 TAF1 TAF5 TAF5 GTF2F1 GTF2F1 GTF2A1L GTF2A1L TAF11 TAF11 TAF4 TAF4 TAF4B TAF4B CDK7 CDK7 GTF2H2 GTF2H2 CCNH CCNH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (779 aa)
TBPL2TATA box-binding protein-like protein 2. (331 aa)
GTF2H5General transcription factor IIH subunit 5. (115 aa)
TBPTATA-box-binding protein. (301 aa)
TAF5LTAF5-like RNA polymerase II p300/CBP-associated factor-associated factor subunit 5L. (576 aa)
TBPL1TATA box-binding protein-like protein 1. (255 aa)
TAF6LTAF6-like RNA polymerase II p300/CBP-associated factor-associated factor subunit 6L. (629 aa)
GTF2BTranscription initiation factor IIB. (316 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (404 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
GTF2H1L-lactate dehydrogenase. (910 aa)
TAF13Transcription initiation factor TFIID subunit 13. (124 aa)
GTF2E1General transcription factor IIE subunit 1. (391 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
TAF15TATA-binding protein-associated factor 2N isoform B. (474 aa)
TAF6-1Transcription initiation factor TFIID subunit 6 isoform A. (666 aa)
TAF2Transcription initiation factor TFIID subunit 2. (1145 aa)
TAF10Transcription initiation factor TFIID subunit 10. (121 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (795 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
GTF2IRD1General transcription factor II-I repeat domain-containing protein 1 isoform A. (1008 aa)
Y1Q_0007802Transcription initiation factor TFIID subunit 4-like. (750 aa)
TAF8-1Transcription initiation factor TFIID subunit 8 isoform B; Belongs to the glycosyl hydrolase 18 family. (774 aa)
TAF7LTranscription initiation factor TFIID subunit 7-like. (353 aa)
TAF9BTranscription initiation factor TFIID subunit 9B. (255 aa)
GTF2H3General transcription factor IIH subunit 3. (328 aa)
TAF1Transcription initiation factor TFIID subunit. (1966 aa)
TAF5Transcription initiation factor TFIID subunit 5. (655 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (627 aa)
GTF2A1LTFIIA-alpha and beta-like factor. (488 aa)
TAF11Transcription initiation factor TFIID subunit 11. (153 aa)
TAF4Transcription initiation factor TFIID subunit 4. (976 aa)
TAF4BProteasome endopeptidase complex; Belongs to the peptidase T1A family. (1010 aa)
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCNHCyclin-H; Belongs to the cyclin family. (247 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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