STRINGSTRING
TSHZ3 TSHZ3 PBX1 PBX1 HOXB1 HOXB1 PBX4 PBX4 HOXA1 HOXA1 PKNOX1 PKNOX1 MEIS2 MEIS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TSHZ3Teashirt zinc finger homeobox 3. (1088 aa)
PBX1PBX homeobox 1. (430 aa)
HOXB1Homeobox B1. (316 aa)
PBX4PBX homeobox 4. (439 aa)
HOXA1Homeobox A1. (334 aa)
PKNOX1PBX/knotted 1 homeobox 1. (449 aa)
MEIS2Meis homeobox 2. (442 aa)
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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