15 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_08228	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (148 aa)
	N302_14711	Mitogen-activated protein kinase. (320 aa)
	N302_00744	Dual specificity protein phosphatase 10. (481 aa)
	N302_12182	Dual specificity protein phosphatase 16. (470 aa)
	N302_10112	Dual specificity protein phosphatase 7. (252 aa)
	N302_10078	MAP kinase-activated protein kinase 3; Belongs to the protein kinase superfamily. (386 aa)
	N302_08838	Receptor-type tyrosine-protein phosphatase R. (536 aa)
	N302_11817	Dual specificity mitogen-activated protein kinase kinase 3; Belongs to the protein kinase superfamily. (330 aa)
	N302_01461	Mitogen-activated protein kinase. (320 aa)
	N302_13697	Tyrosine-protein phosphatase non-receptor type 5. (521 aa)
	N302_14710	Mitogen-activated protein kinase 13. (111 aa)
	N302_09090	MAP kinase-activated protein kinase 2. (297 aa)
	N302_06395	Mitogen-activated protein kinase. (321 aa)
	N302_06396	Mitogen-activated protein kinase. (323 aa)
	N302_14176	Tyrosine-protein phosphatase non-receptor type 7. (363 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_00744	N302_01461	A0A091EHV5	A0A091ESG6	Dual specificity protein phosphatase 10.	Mitogen-activated protein kinase.	0.965
N302_00744	N302_06395	A0A091EHV5	A0A091F6M9	Dual specificity protein phosphatase 10.	Mitogen-activated protein kinase.	0.907
N302_00744	N302_06396	A0A091EHV5	A0A091FB83	Dual specificity protein phosphatase 10.	Mitogen-activated protein kinase.	0.933
N302_00744	N302_08838	A0A091EHV5	A0A091EQ53	Dual specificity protein phosphatase 10.	Receptor-type tyrosine-protein phosphatase R.	0.419
N302_00744	N302_10112	A0A091EHV5	A0A091ELQ6	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 7.	0.533
N302_00744	N302_12182	A0A091EHV5	A0A091EJX8	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 16.	0.566
N302_00744	N302_13697	A0A091EHV5	A0A091EYD3	Dual specificity protein phosphatase 10.	Tyrosine-protein phosphatase non-receptor type 5.	0.494
N302_00744	N302_14176	A0A091EHV5	A0A091FMD4	Dual specificity protein phosphatase 10.	Tyrosine-protein phosphatase non-receptor type 7.	0.430
N302_00744	N302_14710	A0A091EHV5	A0A091EZ99	Dual specificity protein phosphatase 10.	Mitogen-activated protein kinase 13.	0.977
N302_00744	N302_14711	A0A091EHV5	A0A091ECW4	Dual specificity protein phosphatase 10.	Mitogen-activated protein kinase.	0.983
N302_01461	N302_00744	A0A091ESG6	A0A091EHV5	Mitogen-activated protein kinase.	Dual specificity protein phosphatase 10.	0.965
N302_01461	N302_06395	A0A091ESG6	A0A091F6M9	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.903
N302_01461	N302_06396	A0A091ESG6	A0A091FB83	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.824
N302_01461	N302_08228	A0A091ESG6	A0A091E364	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.955
N302_01461	N302_08838	A0A091ESG6	A0A091EQ53	Mitogen-activated protein kinase.	Receptor-type tyrosine-protein phosphatase R.	0.977
N302_01461	N302_09090	A0A091ESG6	A0A091F2X4	Mitogen-activated protein kinase.	MAP kinase-activated protein kinase 2.	0.833
N302_01461	N302_10078	A0A091ESG6	A0A091ENK7	Mitogen-activated protein kinase.	MAP kinase-activated protein kinase 3; Belongs to the protein kinase superfamily.	0.832
N302_01461	N302_10112	A0A091ESG6	A0A091ELQ6	Mitogen-activated protein kinase.	Dual specificity protein phosphatase 7.	0.983
N302_01461	N302_11817	A0A091ESG6	A0A091ERT2	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 3; Belongs to the protein kinase superfamily.	0.976
N302_01461	N302_12182	A0A091ESG6	A0A091EJX8	Mitogen-activated protein kinase.	Dual specificity protein phosphatase 16.	0.963