STRINGSTRING
N302_01562 N302_01562 N302_00280 N302_00280 N302_12033 N302_12033 N302_05439 N302_05439 N302_07610 N302_07610 N302_13339 N302_13339 N302_00788 N302_00788 PAFAH1B1 PAFAH1B1 N302_01344 N302_01344 N302_07562 N302_07562 N302_03902 N302_03902 N302_02360 N302_02360 N302_16468 N302_16468 N302_03903 N302_03903
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N302_01562Cytoskeleton-associated protein 5. (2035 aa)
N302_00280Microtubule-associated protein RP/EB family member 1. (263 aa)
N302_12033Stromal interaction molecule 1. (112 aa)
N302_05439Microtubule-associated protein RP/EB family member 3. (216 aa)
N302_07610Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (866 aa)
N302_13339Microtubule-associated protein RP/EB family member 2. (265 aa)
N302_00788CAP-Gly domain-containing linker protein 4. (699 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N302_01344CAP-Gly domain-containing linker protein 1. (1401 aa)
N302_07562Small kinetochore-associated protein. (220 aa)
N302_03902Dynactin subunit 1. (116 aa)
N302_02360CLIP-associating protein 1. (1475 aa)
N302_16468CAP-Gly domain-containing linker protein 2. (1040 aa)
N302_03903Dynactin subunit 1. (109 aa)
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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