11 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_09330	Small nuclear ribonucleoprotein G. (59 aa)
	N302_14732	U1 small nuclear ribonucleoprotein C. (157 aa)
	N302_12782	Putative RNA-binding protein Luc7-like 2. (342 aa)
	N302_02448	U6 snRNA-associated Sm-like LSm7. (101 aa)
	N302_09816	Splicing factor 3B subunit 1. (1292 aa)
	N302_00248	Small nuclear ribonucleoprotein-associated protein B. (239 aa)
	N302_07119	U1 small nuclear ribonucleoprotein 70 kDa. (51 aa)
	N302_10949	Pre-mRNA-processing factor 40 A. (853 aa)
	N302_12922	Putative RNA-binding protein Luc7-like 1. (350 aa)
	N302_12153	Luc7-like 3. (399 aa)
	N302_02398	Splicing factor 3A subunit 2. (205 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_00248	N302_02398	A0A091E4U8	A0A091EV70	Small nuclear ribonucleoprotein-associated protein B.	Splicing factor 3A subunit 2.	0.992
N302_00248	N302_02448	A0A091E4U8	A0A091E8W5	Small nuclear ribonucleoprotein-associated protein B.	U6 snRNA-associated Sm-like LSm7.	0.982
N302_00248	N302_07119	A0A091E4U8	A0A091E2Q9	Small nuclear ribonucleoprotein-associated protein B.	U1 small nuclear ribonucleoprotein 70 kDa.	0.977
N302_00248	N302_09330	A0A091E4U8	A0A091EC04	Small nuclear ribonucleoprotein-associated protein B.	Small nuclear ribonucleoprotein G.	0.999
N302_00248	N302_09816	A0A091E4U8	A0A091E883	Small nuclear ribonucleoprotein-associated protein B.	Splicing factor 3B subunit 1.	0.986
N302_00248	N302_12153	A0A091E4U8	A0A091EYN1	Small nuclear ribonucleoprotein-associated protein B.	Luc7-like 3.	0.814
N302_00248	N302_12782	A0A091E4U8	A0A091ETX6	Small nuclear ribonucleoprotein-associated protein B.	Putative RNA-binding protein Luc7-like 2.	0.814
N302_00248	N302_12922	A0A091E4U8	A0A091F355	Small nuclear ribonucleoprotein-associated protein B.	Putative RNA-binding protein Luc7-like 1.	0.814
N302_00248	N302_14732	A0A091E4U8	A0A091ECY5	Small nuclear ribonucleoprotein-associated protein B.	U1 small nuclear ribonucleoprotein C.	0.982
N302_02398	N302_00248	A0A091EV70	A0A091E4U8	Splicing factor 3A subunit 2.	Small nuclear ribonucleoprotein-associated protein B.	0.992
N302_02398	N302_02448	A0A091EV70	A0A091E8W5	Splicing factor 3A subunit 2.	U6 snRNA-associated Sm-like LSm7.	0.930
N302_02398	N302_07119	A0A091EV70	A0A091E2Q9	Splicing factor 3A subunit 2.	U1 small nuclear ribonucleoprotein 70 kDa.	0.866
N302_02398	N302_09330	A0A091EV70	A0A091EC04	Splicing factor 3A subunit 2.	Small nuclear ribonucleoprotein G.	0.986
N302_02398	N302_09816	A0A091EV70	A0A091E883	Splicing factor 3A subunit 2.	Splicing factor 3B subunit 1.	0.996
N302_02398	N302_10949	A0A091EV70	A0A091EU87	Splicing factor 3A subunit 2.	Pre-mRNA-processing factor 40 A.	0.423
N302_02398	N302_12153	A0A091EV70	A0A091EYN1	Splicing factor 3A subunit 2.	Luc7-like 3.	0.695
N302_02398	N302_12782	A0A091EV70	A0A091ETX6	Splicing factor 3A subunit 2.	Putative RNA-binding protein Luc7-like 2.	0.679
N302_02398	N302_12922	A0A091EV70	A0A091F355	Splicing factor 3A subunit 2.	Putative RNA-binding protein Luc7-like 1.	0.679
N302_02398	N302_14732	A0A091EV70	A0A091ECY5	Splicing factor 3A subunit 2.	U1 small nuclear ribonucleoprotein C.	0.951
N302_02448	N302_00248	A0A091E8W5	A0A091E4U8	U6 snRNA-associated Sm-like LSm7.	Small nuclear ribonucleoprotein-associated protein B.	0.982