95 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_08903	D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family. (287 aa)
	N302_06321	Guanine nucleotide-binding protein G(I) subunit alpha-1. (367 aa)
	N302_13198	CDK5 regulatory subunit-associated protein 2. (1774 aa)
	N302_04135	Pericentriolar material 1 protein. (1898 aa)
	N302_05629	Mitotic interactor and substrate of PLK1. (736 aa)
	N302_03245	Coiled-coil domain-containing protein 61. (414 aa)
	N302_16362	Sperm-associated antigen 5. (98 aa)
	N302_16340	Pericentrin. (113 aa)
	N302_10287	Uncharacterized protein. (402 aa)
	N302_06521	Ninein. (1058 aa)
	N302_11063	Serine/threonine-protein kinase Chk1. (427 aa)
	N302_01997	Centrosomal protein KIAA1731. (164 aa)
	N302_10447	Uncharacterized protein. (160 aa)
	N302_06034	Rab-like 2A. (176 aa)
	N302_13985	Proto-oncogene tyrosine-protein kinase LCK. (427 aa)
	N302_05734	Protein Hook 3. (716 aa)
	N302_04411	Coiled-coil domain-containing protein 13. (381 aa)
	N302_02680	Kinesin-like KIF24; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1276 aa)
	N302_05175	Ras association domain-containing protein 8. (419 aa)
	N302_12068	Centrosomal protein C10orf90. (593 aa)
	N302_09728	Ankyrin repeat and fibronectin type-III domain-containing protein 1. (690 aa)
	N302_13162	Uncharacterized protein C9orf114. (349 aa)
	N302_06825	Serine/threonine-protein kinase Nek2. (424 aa)
	N302_01881	Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1418 aa)
	N302_01865	Integrin beta-1-binding protein 1. (160 aa)
	N302_15660	Centrosomal protein of 290 kDa. (2474 aa)
	N302_07970	Centrosomal protein of 97 kDa. (849 aa)
	N302_11411	Tetratricopeptide repeat protein 39A. (550 aa)
	N302_09729	Uncharacterized protein. (126 aa)
	N302_13143	Ubiquitin carboxyl-terminal hydrolase. (906 aa)
	N302_11504	Adenylate kinase isoenzyme 5; Belongs to the adenylate kinase family. (551 aa)
	N302_16342	Pericentrin. (135 aa)
	N302_01983	EF-hand domain-containing protein 1. (618 aa)
	N302_01805	Tubulin polyglutamylase TTLL5. (1238 aa)
	N302_02501	Centrosomal protein kizuna. (80 aa)
	N302_01503	Ras association domain-containing protein 8. (439 aa)
	N302_16341	Pericentrin. (132 aa)
	N302_11506	Ubiquitin carboxyl-terminal hydrolase. (860 aa)
	N302_02341	Coiled-coil domain-containing protein 14. (919 aa)
	N302_16360	Putative serine/threonine-protein kinase SgK494. (164 aa)
	N302_01160	Oral-facial-digital syndrome 1 protein. (1018 aa)
	N302_14167	Guanine nucleotide-binding protein G(K) subunit alpha. (319 aa)
	N302_10286	Ankyrin repeat and fibronectin type-III domain-containing protein 1. (681 aa)
	N302_02808	Centrosomal protein of 85 kDa-like. (767 aa)
	N302_02354	IQ calmodulin-binding motif-containing protein 1. (594 aa)
	N302_02321	Centrosomal protein of 70 kDa. (593 aa)
	N302_03973	Sjoegren syndrome nuclear autoantigen 1. (112 aa)
	N302_03966	Serine/threonine-protein kinase greatwall. (888 aa)
	N302_13242	Werner syndrome ATP-dependent helicase. (1360 aa)
	N302_01996	Centrosomal protein KIAA1731. (115 aa)
	N302_12856	Protein NEDD1. (668 aa)
	N302_02016	Centrosomal protein of 57 kDa. (479 aa)
	N302_12684	Cytohesin-4. (362 aa)
	N302_14087	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (457 aa)
	N302_11078	Uncharacterized protein. (279 aa)
	N302_02000	Centrosomal protein KIAA1731. (246 aa)
	N302_13656	Nucleophosmin. (280 aa)
	N302_10448	Centrosomal protein of 68 kDa. (152 aa)
	OLA1	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (396 aa)
	N302_11953	Nuclear distribution protein nudE 1. (343 aa)
	N302_11951	LisH domain-containing protein FOPNL. (166 aa)
	N302_11936	Centriolar coiled-coil protein of 110 kDa. (1010 aa)
	N302_09154	X-linked retinitis pigmentosa GTPase regulator. (699 aa)
	N302_10157	Coiled-coil domain-containing protein 66. (895 aa)
	N302_08057	Nucleoside diphosphate kinase 7; Belongs to the NDK family. (369 aa)
	N302_14645	Progesterone-induced-blocking factor 1. (751 aa)
	N302_15481	LIM domain kinase 2. (637 aa)
	N302_08077	Protein FAM46C. (391 aa)
	N302_04813	Tetratricopeptide repeat protein 39B. (546 aa)
	N302_00706	Denticleless protein. (711 aa)
	N302_10133	Guanine nucleotide-binding protein G(I) subunit alpha-2. (317 aa)
	N302_15904	Centlein. (259 aa)
	N302_09022	Rotatin. (2222 aa)
	N302_09004	Centrosomal protein of 192 kDa. (1574 aa)
	N302_09003	Uncharacterized protein. (156 aa)
	N302_03347	Glucose-6-phosphate 1-dehydrogenase. (327 aa)
	N302_13791	Centrosomal protein of 63 kDa. (709 aa)
	N302_15129	Transforming acidic coiled-coil-containing protein 3. (903 aa)
	N302_15043	Transmembrane anterior posterior transformation protein 1. (501 aa)
	N302_00678	Outer dense fiber protein 2-like. (516 aa)
	N302_13381	UBX domain-containing protein 2B. (269 aa)
	N302_08990	Uncharacterized protein. (164 aa)
	N302_08598	Ninein-like. (172 aa)
	N302_13499	Poly [ADP-ribose] polymerase. (1103 aa)
	N302_13465	Tyrosine-protein phosphatase non-receptor type 20. (301 aa)
	N302_15698	Centrosomal protein of 120 kDa. (969 aa)
	N302_04677	Coiled-coil domain-containing protein 77. (478 aa)
	N302_13600	ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	N302_03395	Coiled-coil domain-containing protein 81. (155 aa)
	N302_09240	Uncharacterized protein. (104 aa)
	N302_13509	Centrosomal protein of 55 kDa. (457 aa)
	N302_10854	N-alpha-acetyltransferase 40. (194 aa)
	N302_15835	Uncharacterized protein. (72 aa)
	N302_15838	Alstrom syndrome protein 1. (152 aa)
	N302_15837	Uncharacterized protein. (175 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_00678	N302_01983	A0A091EF90	A0A091F5B9	Outer dense fiber protein 2-like.	EF-hand domain-containing protein 1.	0.409
N302_00706	N302_11063	A0A091EJT7	A0A091FJV1	Denticleless protein.	Serine/threonine-protein kinase Chk1.	0.843
N302_00706	N302_13509	A0A091EJT7	A0A091E8A6	Denticleless protein.	Centrosomal protein of 55 kDa.	0.649
N302_01160	N302_02341	A0A091F1N3	A0A091F289	Oral-facial-digital syndrome 1 protein.	Coiled-coil domain-containing protein 14.	0.694
N302_01160	N302_02354	A0A091F1N3	A0A091F0B1	Oral-facial-digital syndrome 1 protein.	IQ calmodulin-binding motif-containing protein 1.	0.508
N302_01160	N302_04135	A0A091F1N3	A0A091FUZ7	Oral-facial-digital syndrome 1 protein.	Pericentriolar material 1 protein.	0.800
N302_01160	N302_09004	A0A091F1N3	A0A091EI94	Oral-facial-digital syndrome 1 protein.	Centrosomal protein of 192 kDa.	0.403
N302_01160	N302_11936	A0A091F1N3	A0A091ERC6	Oral-facial-digital syndrome 1 protein.	Centriolar coiled-coil protein of 110 kDa.	0.400
N302_01160	N302_11951	A0A091F1N3	A0A091ERD7	Oral-facial-digital syndrome 1 protein.	LisH domain-containing protein FOPNL.	0.652
N302_01160	N302_11953	A0A091F1N3	A0A091ES85	Oral-facial-digital syndrome 1 protein.	Nuclear distribution protein nudE 1.	0.636
N302_01160	N302_13198	A0A091F1N3	A0A091FWE3	Oral-facial-digital syndrome 1 protein.	CDK5 regulatory subunit-associated protein 2.	0.652
N302_01160	N302_15660	A0A091F1N3	A0A091F7C2	Oral-facial-digital syndrome 1 protein.	Centrosomal protein of 290 kDa.	0.582
N302_01160	N302_15698	A0A091F1N3	A0A091ECF9	Oral-facial-digital syndrome 1 protein.	Centrosomal protein of 120 kDa.	0.437
N302_01160	N302_16340	A0A091F1N3	A0A091FS24	Oral-facial-digital syndrome 1 protein.	Pericentrin.	0.439
N302_01160	N302_16341	A0A091F1N3	A0A091F471	Oral-facial-digital syndrome 1 protein.	Pericentrin.	0.439
N302_01160	N302_16342	A0A091F1N3	A0A091F5E3	Oral-facial-digital syndrome 1 protein.	Pericentrin.	0.439
N302_01805	N302_02341	A0A091F5B4	A0A091F289	Tubulin polyglutamylase TTLL5.	Coiled-coil domain-containing protein 14.	0.593
N302_01805	N302_03245	A0A091F5B4	A0A091FSV3	Tubulin polyglutamylase TTLL5.	Coiled-coil domain-containing protein 61.	0.474
N302_01805	N302_11951	A0A091F5B4	A0A091ERD7	Tubulin polyglutamylase TTLL5.	LisH domain-containing protein FOPNL.	0.463
N302_01805	N302_14645	A0A091F5B4	A0A091ELV9	Tubulin polyglutamylase TTLL5.	Progesterone-induced-blocking factor 1.	0.496